Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme36263g00001 ATGTGTCCTGAGCTCCTCGCGGACATACCATATGGTTATAAATCTGATATATGGTCTCTCGGTTGCTGCATGTTTGAGATTGCTGCACATCAATCAGCATTTCGTGCTCCGGACATGGCTGGTCTTATCAATAAAATAAACCGATCTTCCATTTCTCCACTTCCAATTGTTTATTCTCCCACACTGAAACAAATTATCAAGAGCATGCTGAGGAAAAATCCAGAACATAGGCCAACAGCTGCCGAATTGTTAAGACATCCACATTTACAACCTTATGTTATTCGCTGTCAGACCGCATCGTCTAATGTTCTTCCAATATATCCCGTAGTTAACTCAAAGGATAAAACAAAAAGATCTCCTAAATCTAGTGGCAGAGAAATGGGATTTGTAAATCATTTGGAACGAGTTCATCCGATTGAGGGAAATGGTGATGTACAGACAAGAAATCTTCGTAACAATGGCGAGGTAACAATCTCAACAAGCACCCAATACAACCTTGAGACCAAGATGGATGCTCTTACAAGCTACACAGTCGAATCTTCTACTAGTATTAGCGACTCAAAAGATGGTTCAACAACATCTGAATCAACTACTTGTAGTGTGTGCAAGGAGGACTATAAAATTAGACCACCAAGGGAAATGGCTAACAATGGAATCACCTCGAAGA 667 0.4048 MCPELLADIPYGYKSDIWSLGCCMFEIAAHQSAFRAPDMAGLINKINRSSISPLPIVYSPTLKQIIKSMLRKNPEHRPTAAELLRHPHLQPYVIRCQTASSNVLPIYPVVNSKDKTKRSPKSSGREMGFVNHLERVHPIEGNGDVQTRNLRNNGEVTISTSTQYNLETKMDALTSYTVESSTSISDSKDGSTTSESTTCSVCKEDYKIRPPREMANNGITSK 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme36263g00001 222 Pfam Protein kinase domain 1 88 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme36263g00001 222 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 198 - -
Trme36263g00001 222 MobiDBLite consensus disorder prediction 181 222 - -
Trme36263g00001 222 MobiDBLite consensus disorder prediction 181 201 - -
Trme36263g00001 222 Gene3D Transferase(Phosphotransferase) domain 1 1 137 - -
Trme36263g00001 222 SUPERFAMILY Protein kinase-like (PK-like) 1 150 IPR011009 -
Trme36263g00001 222 ProSiteProfiles Protein kinase domain profile. 1 89 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme36263g00001 Trme-Chr36263 1 1048 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme36263g00001 11 90 MAP Kinase Kinase Kinase AT4G08500 37.500 6.30e-12 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Trme36263g00001 Pkinase 2.4e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme36263g00001 K08857 - gmx:100777214 334.724