Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme36239g00001 ATGGGTATTGCTGGTACAGAAGTTGCCAAAGAGAGCTCTGATATCATTATTTTAGATGACAACTTTGCTTCAGTTGTGAAGGTTGTCAGATGGGGTCGGTCTGTTTATGCGAATATTCAGAAATTTATCCAGTTTCAGCTGACAGTCAATGTGGCAGCTCTTGTTATAAATGTTGTTGCTGCAGTTTCCTCTGGTGATGTTCCACTGAACGCAGTGCAGCTTCTCTGGGTGAATCTTATCATGGATACTCTGGGAGCACTAGCCTTGGCAACTGAACCGCCAACTGATCACCTGATGGATCGGACTCCTGTGGGTCGAAG 320 0.4531 MGIAGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMDRTPVGR 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme36239g00001 106 Pfam Cation transporting ATPase, C-terminus 67 104 IPR006068 -
Trme36239g00001 106 SUPERFAMILY Calcium ATPase, transmembrane domain M 32 105 IPR023298 -
Trme36239g00001 106 PANTHER CATION TRANSPORTING ATPASE 1 106 - -
Trme36239g00001 106 Gene3D - 1 106 - -
Trme36239g00001 106 SUPERFAMILY HAD-like 1 44 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme36239g00001 Trme-Chr36239 161 762 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme36239g00001 1 106 Primary Pumps ATPases AT3G21180 95.283 7.48e-64 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme36239g00001 K01537 - gmx:100820121 194.897