Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme3620g00001 ATGGAGGATGTAATTGTTGGTGTTATAGACTCTGGAGTTTGGCCTGAAAGCAAGAGCTTTGACGATACCGGATATGGTCCCATCCCCAAAACATGGAAAGGAAAGTGCGAAACAGGTACCGATTTCACAGCTTCAAACTGTAATAAGAAATTGATCGGTGCAAGATTCTTTCTAAAGGGCTATGAGGCTGATAAGGGTAGTCCGATCAATGAAACCAAAGAATCTAGGTCACCACGAGACACTAATGGCCATGGAACCCACACAGCGAGCACAGCAGTAGGATCTCCGGTGAGAAATGCGAGTCTTTTCGGTTACGCGGCCGGTACAGCACGTGGGATGGCCCCAAGGGCCAGAGTTGCTATCTACAAGGTTTGCTGGGAAGGTCATGGTTGTTTGGGTTCTGATTATCTAGCTGCAATAGATCAGGCTATCACCGACAAAGTCAATGTCCTTTCATTGTCGCTCGGAACTACTCCACTTGATTATGTAGAGGACCCCCTCGCAATCGGAGCCTTTGCAGCAATGGAGCATGGGATTCTAGTATCTTGTGCAGGAGGAAACTCAGGTCCCCATGCTTCTTTGATCACCAATGTTGCACCTTGGATTACCACAGTGGGAGCTGGCACTCTTGATCGAGATTTCCCTGCATATATCACTCTCGGAAACAGGCAGAATTATACAGGAGTGTCACTTTATAATGGTAGTTCTTTACCTGATACTCCTATGTCGTTAATATACGCAGGGAATGCAAGCATTCAAGGTGAAGAAGCAAACGGTAGAAAGTGTGCGGAGGGAAGCTTAGACAAAGAAAAAGTAGAAGGAAAGATTGTAATGTGTGAGTCTGGATTCCTTAATGGGCCGGAGAAAGGAAATATAGTTAAATCAGTTGGTGGTTTGGGCATGGTATTGGCTACCTTTGATTACGATGAAGAAGAGCTGTTGGCAGAACCCCATATTTTGCCAACAATAGTGGTGAAATTCAAAGATGGTCAAGCCATCAAGAAATACTTGTTTTCCCAAAATCCAAATAAATCGATGGCTACGGTTGTATATGAAAGAACACAGTTTGGGGTTGAGCCATCTCCAGTTGTTGCGTTGTTTAGCTCACGAGGCCCGAATTCAATAACCCCACAAATATTGAAGCCTGATGTCATTGTTCCAGGTGTTAACATCTTGGCAGCATTTAGTAGGAAAGCGAGTCCCACTAATGAGGATTGGGATCCAAGGCGTGTGGATTTTAACATTTACTCAGGCACGTCCATGGCATGCCCTCACATGAGCGGGATAGCAGCTCTAATCAAGTCGATTCACCCAGATTGGAGCCCAGCCGCCATTCGATCTGCACTGATGACAACGGCTTATACGGCTTACAAGAACGGAAAGACATTGTTGGACCGTAGTGACAAACAGCCAGCGACACCGTTTGATTTTGGGGCTGGACATGTGGACCCCGTTCTTGCACTAAATCCCGGACTTGTCTATGATCTGACGGTGGACGACTACTTGAGCTTCCTCTGCGCATTAAACTACTCAGCTGCTGATATGGAAGTCGTGGTGAGGAGAAATTTCACATGTGACCCAAAGAAACATTACAGTGTAACAAACCTTAATTACCCTTCATTTGCTGTGGTCTTTGAGGGCGGGCTTGGTACAAAGAAGATTAAACACACGCGGACTCTTACTAATGTGGGTGCGGCAGGAACATACAAGGTATCAATTAAGTCAAATGCTCCATTTGTCAAGATCTCGGTTGAACCAGAAGTTTTAAGTTTCAAGACAAAAGAGAAAAAGTTATACACAATTACATTTACCACATCTGGTTCGAAACCAAATAGCTCTCAAAGTTTTGGAAGTTTGGAATGGTCTGATGGAAAGACTATTGTTAGAAGTCCGATAGCATTTAGCTGGAAATGA 1914 0.4472 MEDVIVGVIDSGVWPESKSFDDTGYGPIPKTWKGKCETGTDFTASNCNKKLIGARFFLKGYEADKGSPINETKESRSPRDTNGHGTHTASTAVGSPVRNASLFGYAAGTARGMAPRARVAIYKVCWEGHGCLGSDYLAAIDQAITDKVNVLSLSLGTTPLDYVEDPLAIGAFAAMEHGILVSCAGGNSGPHASLITNVAPWITTVGAGTLDRDFPAYITLGNRQNYTGVSLYNGSSLPDTPMSLIYAGNASIQGEEANGRKCAEGSLDKEKVEGKIVMCESGFLNGPEKGNIVKSVGGLGMVLATFDYDEEELLAEPHILPTIVVKFKDGQAIKKYLFSQNPNKSMATVVYERTQFGVEPSPVVALFSSRGPNSITPQILKPDVIVPGVNILAAFSRKASPTNEDWDPRRVDFNIYSGTSMACPHMSGIAALIKSIHPDWSPAAIRSALMTTAYTAYKNGKTLLDRSDKQPATPFDFGAGHVDPVLALNPGLVYDLTVDDYLSFLCALNYSAADMEVVVRRNFTCDPKKHYSVTNLNYPSFAVVFEGGLGTKKIKHTRTLTNVGAAGTYKVSIKSNAPFVKISVEPEVLSFKTKEKKLYTITFTTSGSKPNSSQSFGSLEWSDGKTIVRSPIAFSWK 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme3620g00001 637 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 633 IPR045051 -
Trme3620g00001 637 Pfam PA domain 262 333 IPR003137 -
Trme3620g00001 637 FunFam subtilisin-like protease SBT1.5 211 356 - -
Trme3620g00001 637 Pfam Fibronectin type-III domain 535 633 IPR041469 -
Trme3620g00001 637 MobiDBLite consensus disorder prediction 67 92 - -
Trme3620g00001 637 Gene3D - 211 357 - -
Trme3620g00001 637 Pfam Subtilase family 3 480 IPR000209 GO:0006508|GO:0008236
Trme3620g00001 637 ProSiteProfiles Serine proteases, subtilase domain profile. 1 488 - -
Trme3620g00001 637 Gene3D Peptidase S8/S53 domain 3 501 IPR036852 GO:0004252|GO:0006508
Trme3620g00001 637 SUPERFAMILY Subtilisin-like 3 492 IPR036852 GO:0004252|GO:0006508
Trme3620g00001 637 CDD PA_subtilisin_like 217 349 - -
Trme3620g00001 637 ProSitePatterns Serine proteases, subtilase family, serine active site. 418 428 IPR023828 -
Trme3620g00001 637 Gene3D - 505 636 - -
Trme3620g00001 637 MobiDBLite consensus disorder prediction 67 81 - -
Trme3620g00001 637 PRINTS Subtilisin serine protease family (S8) signature 1 13 IPR015500 -
Trme3620g00001 637 PRINTS Subtilisin serine protease family (S8) signature 417 433 IPR015500 -
Trme3620g00001 637 PRINTS Subtilisin serine protease family (S8) signature 80 93 IPR015500 -
Trme3620g00001 637 CDD Peptidases_S8_3 2 454 IPR034197 -
Trme3620g00001 637 FunFam Subtilisin-like protease SBT1.5 3 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme3620g00001 Trme-Chr3620 24 1937 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme3620g00001 3 636 Subtilisin-like Serine Gene Family AT5G67360 63.307 0.0 803
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme3620g00001 - - vvo:131650051 871.307