Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme36170g00001 ACTGGCAATGTTAACTCGGTATTGACAAATCAGTCTTCCCAACCAATACTACCAACATCCTCAAATGCTTATGAAACCTATCCGTTCTTTTACGAGGATCCGATCATTCAACAAGGGGGAACTAGTCAATATCCAATACACAATGGCCCTTTTCCTTCTAACAGTTCGGCTCGCAATCTAGGAGAGGTTCCGGTTTCTTTGCCTACTCATGGTCTTGTGAACCAAGGAATCGTGAGCGAAGGACAAGCATCCAGTGAGTTGCATGTACAAAGAAAAGGTGATAATGTCATTCATACAGCGAATGATCGAGTAAAAGTTTTATCAACAGAAGCACCGTATTCTCTTCCTTCGCATCCATTTGAGGGAAGTTTGCAAGGTAATTTGTCAGAGGCACCAGTTCCAGCTGCTGTATCAGAAGCACTCCATCCTGCACTGCCATTAGAAAACAAGATTCCAGCTGTTGTATCAGAAGCTCTGAATCCTACACAGATTTCAAGATCTGGTGAAGATGACTTCTATACTGCATCCGCAGATGCATTCAGTCGTGCTCTTGTTGATGCCGAGTCCAATGTAATTGATTTCAGTTGCCTTGAACCACCTCCACTTCCTAATAGAGTCTATTATTCAGAGAGAATTTTTCCTAGGGAACAGGCAGATTTGCTGAACCGGTCTGCAAAGTCAGATGATGCATATGGTTCTCACTTACTCATGTCAGATTTACTTTCGGATTTGAACCACATGAATTCAGTAAATGAATCGAGCGACATGTTGCACAACGAGAATCTGTCGAATCTGAACACANNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTATATCAGCTTGTGGATTCTGATTTGAAGCGGGTATTATCAGATAACAAAATTTCTGAAAATGAGACAAATGTCTCCAAAGGTAGTCCTAAAGTTCTTCAAGTTGATGAAACCAAGGGCAGTGAGCGTCTTGCATTTCGCCGAGTTCCTTCTGTTGAACATAATGTGAATCTAGCATCTAAACTTCAAGATAACAATTT 1091 0.3795 TGNVNSVLTNQSSQPILPTSSNAYETYPFFYEDPIIQQGGTSQYPIHNGPFPSNSSARNLGEVPVSLPTHGLVNQGIVSEGQASSELHVQRKGDNVIHTANDRVKVLSTEAPYSLPSHPFEGSLQGNLSEAPVPAAVSEALHPALPLENKIPAVVSEALNPTQISRSGEDDFYTASADAFSRALVDAESNVIDFSCLEPPPLPNRVYYSERIFPREQADLLNRSAKSDDAYGSHLLMSDLLSDLNHMNSVNESSDMLHNENLSNLNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYQLVDSDLKRVLSDNKISENETNVSKGSPKVLQVDETKGSERLAFRRVPSVEHNVNLASKLQDNN 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme36170g00001 363 MobiDBLite consensus disorder prediction 41 63 - -
Trme36170g00001 363 MobiDBLite consensus disorder prediction 41 62 - -
Trme36170g00001 363 Coils Coil 262 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme36170g00001 Trme-Chr36170 1 1091 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme36170g00001 11 260 MAP Kinase Kinase Kinase AT1G79570 28.676 2.54e-14 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme36170g00001 - - mtr:120578222 566.229