Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme36164g00001 ATGAATTTGTTCCTAATAAGAGCCTTGATTACTTCATTTTCGGTAGATCAAACAAAGAGAGCACACTTAAATTGGGAAATAAGGTATAAAATCATTGCGGGTACTGCTCGAGGAATTCTTTACCTTCACGAGGATTCTCGGTTAACCATTATCCATCGTGATCTCAAAGCAAGCAACATTCTTTTAGATGAAGAGATGAATCCAAAGATAGCAGATTTTGGCATGGCTAGATTGTTTGGTGTGGGCCAAACTCAAGAAAATACAAATAGAATTGTGGGAACCTACGGATATATGGCACCTGAGTATGCAATGCATGGACAGTTTTCGGTGAAGTCAGATGTGTTTAGTTTTGGTGTATTGATTCTTGAGATTATAAGTGGCTACAAAAATAGTTGCATTGGGGAGAGTATGGAGTATCTACTGAGCTTT 429 0.38 MNLFLIRALITSFSVDQTKRAHLNWEIRYKIIAGTARGILYLHEDSRLTIIHRDLKASNILLDEEMNPKIADFGMARLFGVGQTQENTNRIVGTYGYMAPEYAMHGQFSVKSDVFSFGVLILEIISGYKNSCIGESMEYLLSF 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme36164g00001 143 ProSiteProfiles Protein kinase domain profile. 1 143 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme36164g00001 143 ProSitePatterns Serine/Threonine protein kinases active-site signature. 50 62 IPR008271 GO:0004672|GO:0006468
Trme36164g00001 143 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 7 96 - -
Trme36164g00001 143 Gene3D Transferase(Phosphotransferase) domain 1 11 142 - -
Trme36164g00001 143 SUPERFAMILY Protein kinase-like (PK-like) 18 129 IPR011009 -
Trme36164g00001 143 SMART serkin_6 4 140 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme36164g00001 143 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 11 132 - -
Trme36164g00001 143 Pfam Protein kinase domain 25 128 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme36164g00001 Trme-Chr36164 270 914 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme36164g00001 13 136 Receptor kinase-like Gene Family AT4G23230 74.194 1.01e-62 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trme36164g00001 Pkinase 6e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme36164g00001 - - mnt:21389744 214.157