Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme36156g00001 ATGCCTTGCAAGCATGTGTATCATGATGACTGCTTGCTTCCATGGCTTGAATTGCATAATTCTTGCCCTGTTTGTCGATATGAATTGCCAACTGATGATGCTGATTATGAGAATCGTGGTAGGGGTAATGATGGTGATGGGTTGAGGTCTGTTGTCGATGGTAATAGTACTGGTAGTGGTGCTGGTAATGGTGGTGGAGGAACGGGCAACAGACCTGTCCACAGGACTTTTAGAATATCTCTGCGGTATCCTTTCAGTGCTGGTGACTCTGCTCAGGACTCTGGTGAAAGGGGATTGGGAAATAGGCAAGAGGATTTGGATTGA 324 0.463 MPCKHVYHDDCLLPWLELHNSCPVCRYELPTDDADYENRGRGNDGDGLRSVVDGNSTGSGAGNGGGGTGNRPVHRTFRISLRYPFSAGDSAQDSGERGLGNRQEDLD 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme36156g00001 107 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 1 30 - -
Trme36156g00001 107 MobiDBLite consensus disorder prediction 33 107 - -
Trme36156g00001 107 Pfam Zinc finger, C3HC4 type (RING finger) 2 25 - -
Trme36156g00001 107 ProSiteProfiles Zinc finger RING-type profile. 1 26 IPR001841 -
Trme36156g00001 107 SUPERFAMILY RING/U-box 1 32 - -
Trme36156g00001 107 MobiDBLite consensus disorder prediction 50 64 - -
Trme36156g00001 107 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 47 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme36156g00001 Trme-Chr36156 668 991 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme36156g00001 1 42 C3H Transcription Factor Family AT5G15820 59.524 3.41e-16 70.5