Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trme36131g00001 | ATGCTTCGCCTCTGCGAACCATTTTTAGATGCAAATCTAACAAAAAGGGATAAAATTGATGCCAAATATGTACACCACTCAAACCGTTTGAAGCTAAGTGGTTTGACTGCCCTTCATGCGTCATCAGAAGAAGTTACTGAATGGCTTGATAGTAAAAACCCAGCTAAGGCAGGGGAAATGAATCAATGTAATGATGGTGAGAAACGTCTGAAACAATCTCAAGAGGCCAGCAGTTCTGGTAGTAATAATGCCAGTGCAAAATATTCATTTATATGTGAATGCTTCTTTATGACTGCAAGAGTGCTCAACTTGGGGCTTTTAAAAGCATTTTCTGACTTCAAACACTTAGTTCAGGATATTTCTAGAAGTGAAGATACTCTTGCCACACTTAAAAACATGCAGGGACAGTCACCTTCTCCTCAATTGGAATTGGATATAACTCGACTTGAGAAAGAACTTGAGTTGTATTCACAGGAAAAACTTTGTTATGAAGCTCAGATATTGAGG | 507 | 0.3846 | MLRLCEPFLDANLTKRDKIDAKYVHHSNRLKLSGLTALHASSEEVTEWLDSKNPAKAGEMNQCNDGEKRLKQSQEASSSGSNNASAKYSFICECFFMTARVLNLGLLKAFSDFKHLVQDISRSEDTLATLKNMQGQSPSPQLELDITRLEKELELYSQEKLCYEAQILR | 169 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trme36131g00001 | 169 | MobiDBLite | consensus disorder prediction | 50 | 84 | - | - | |
| Trme36131g00001 | 169 | Pfam | Ubiquitin elongating factor core | 1 | 168 | IPR019474 | GO:0000151|GO:0006511|GO:0016567|GO:0034450 | |
| Trme36131g00001 | 169 | PANTHER | UBIQUITINATION FACTOR E4 | 1 | 168 | IPR045132 | GO:0000151|GO:0030433|GO:0034450 | |
| Trme36131g00001 | 169 | Coils | Coil | 139 | 166 | - | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Trme36131g00001 | 1 | 169 | U-box Gene Family | AT5G15400 | 70.286 | 3.03e-75 | 241 |