Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme3607g00001 ATGAACAAAAATATCAAAGCTGGTGATTGTGTGCTGATGCGTCCAGCTGAACCATCCAAACCCTCGTATGTTGCTAGGATCGAGGGGATCGAAGCTGATTCAAGAGGTGCTAACGTCAAAATTCACGTTCGCTGGTATTATCGGCCGGAGGAGTCAATCGGTGGCCGGCGACAGTTTCACGGCTCGAAGGAGGTTTTTCTGTCTGATCATTTTGATGTTCAGAGTGCTGATACAATTGAAGGGAAGTGTACTGTTCACAGTTTCAAGAGCTACACCAAGCTTGATGCTGTTGGTAATGAAGATTTCTTCTGTCGTTTCGAGTACAATTCCGCTACCGGTTCTTTCAATCCTGATAGAGTTGCTGTGTATTGCAAATGTGAGATGCCTTACAATCCGGACGATCTTATGGTCCAGTGCGAGGGATGCAGTGACTGGCATTCAAATCTCTGTTTACAATCACTTGAATGGGATCTTTGTGCAAAGTTCTGCCTTGGCTCTAAG 501 0.4551 MNKNIKAGDCVLMRPAEPSKPSYVARIEGIEADSRGANVKIHVRWYYRPEESIGGRRQFHGSKEVFLSDHFDVQSADTIEGKCTVHSFKSYTKLDAVGNEDFFCRFEYNSATGSFNPDRVAVYCKCEMPYNPDDLMVQCEGCSDWHSNLCLQSLEWDLCAKFCLGSK 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme3607g00001 167 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 118 161 IPR013083 -
Trme3607g00001 167 SMART BAH_4 3 119 IPR001025 GO:0003682
Trme3607g00001 167 ProSiteProfiles BAH domain profile. 3 119 IPR001025 GO:0003682
Trme3607g00001 167 Pfam BAH domain 5 118 IPR001025 GO:0003682
Trme3607g00001 167 Gene3D - 2 117 IPR043151 -
Trme3607g00001 167 SUPERFAMILY FYVE/PHD zinc finger 112 156 IPR011011 -
Trme3607g00001 167 PANTHER OS08G0421900 PROTEIN 2 152 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme3607g00001 23 121 Core DNA Replication Machinery Family AT4G14700 31.313 1.69e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme3607g00001 K25868 - zju:107426744 297.745