Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme36066g00001 ATGGAACGAAGCGGAAGTGTGCTTATGCAACGATACGAAATAGGGAAATTATTAGGTCAAGGAACCTTTGCAAAGGTCTATCATGCAAGGAACCTAAAAAATGGCATGAATGTTGCCATCAAAGTTATTGATAAAGAGAAGGTTCTGAGGGTTGGGATGATCGATCAAATTAAGCGTGAAATTTCAGTTATGAGACTCGTCAGGCATCCACATGTTGTCGAGCTTTACGAGGTAATGGCGAGCAAATCCAAAATTTACGTTGTTATGGAGTATGTAAAAGGCGGCGAACTCTTCGACAAGGTATCGAAAGGAAAACTAAAGCATGATGATGCAAGGAGATACTTTCAGCAATTGATCAGTGCTGTTGATTACTGTCATAGCAGAGGTGTGTGTCATCGCGATTTAAAACCAGAAAATCTTCTGTTGGATGAAAATGGAAATTTGAAGGTCTCAGATTTCGGGTTAAGTGCACTTGCCGAGACTAAGCACCAAGATGGATTACTCCATACTACATGTGGCACTCCTGCGTATGTCGCTCCGGAAGTGATACACCGCAAGGGATATGATGGGATGAAAGCTGATATATGGTCGTGTGGTGTGATCCTGTATGTTCTATTGGCCGGTTATCTCCCATTTAGAGATCCGAATCTGATAGAGATGTATAGGAAAATCGGTAAGGCTGATTTCAAGTTTCCTAACTGGTTTGCATCGGAT 714 0.4188 MERSGSVLMQRYEIGKLLGQGTFAKVYHARNLKNGMNVAIKVIDKEKVLRVGMIDQIKREISVMRLVRHPHVVELYEVMASKSKIYVVMEYVKGGELFDKVSKGKLKHDDARRYFQQLISAVDYCHSRGVCHRDLKPENLLLDENGNLKVSDFGLSALAETKHQDGLLHTTCGTPAYVAPEVIHRKGYDGMKADIWSCGVILYVLLAGYLPFRDPNLIEMYRKIGKADFKFPNWFASD 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme36066g00001 238 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Trme36066g00001 238 FunFam Maternal embryonic leucine zipper kinase 3 238 - -
Trme36066g00001 238 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Trme36066g00001 238 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Trme36066g00001 238 PIRSF ILK 1 233 - -
Trme36066g00001 238 ProSiteProfiles Protein kinase domain profile. 12 238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme36066g00001 238 Gene3D Transferase(Phosphotransferase) domain 1 3 238 - -
Trme36066g00001 238 SMART serkin_6 12 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme36066g00001 238 SUPERFAMILY Protein kinase-like (PK-like) 8 233 IPR011009 -
Trme36066g00001 238 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 237 - -
Trme36066g00001 238 Pfam Protein kinase domain 12 219 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme36066g00001 Trme-Chr36066 86 799 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme36066g00001 1 236 CBL-interacting serine-threonine protein kinases AT5G01810 78.814 1.18e-144 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Trme36066g00001 Pkinase 5.2e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme36066g00001 K07198 - gmx:100815651 441.039