Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme3605g00002 ATGCTGTTGTGGCCGTTCAAGGTAAATTCTGATTCTAATGATAAACCAAAGGTTGTTGTGACTTGCAAGGGTGAAGAAAAGCACTTTTTTGCTGAAGAAATATCATCTATGGTCCTCACAAAGATGCGGGAGTTTGCTGAAGTATTTTTGGAGTCACCTGTCAAAAATGCAGTGATTACGGTACCTGCTTATTTTAATGATTCACAACGCAGAGCCACCAAAGATGCTGGTGTCATTGCTGGCCTCAATGTAATAAGGATAATCAATGAACCTACTGCTGCTGCGCTTGCATATGGCTTTCAAAAAAGAGCTAATTGTGTTGAAGAGAGAAAAATTTTCATCTCCGATCTTGGTGGTGGAACTTTTGATGTGTCTCTCCTTACAATTAAGAATAATGCCTTTAAAGTCATGGCCACTGCTGGAGACACTCATCTCGGAGGAGAGGACTTTGATAATCGAATGGTGAATCATTTTGTGAATGAGTTGAAGAGGAAAAACAAAGTTGACATTAGTGAAAATTCAAAAGCACTGAGGAAGCTAAGAACGGCCTGTGAGAGGGCAAAAAGGACACTTTCTTACGACACTGAGGCCACAATTGACATAGATGCTATATGTCAGAGTGTCGACTTCTGTTCATCAATCACTCGGGCCAAGTTTGAGCAACTCAACTCGGACCTCTTTGAAAAGTGTATGGAGACTGTTAAGGGTTGTTTTAGTGATGCTAAGATAGACAAAAGTAGTATTGATGATGTTGTACTTGTTGGTGGGTCTTCTAGGATTCCTAAAGTGCAGACTCTGTTGCAAAACTTTTTCAGTGGGAAGGATATTTTTAAAAGCATCAATCCTGACGAGGCTGTTGCTTATGGTGCTGCTGTCCAGGCTGCTTTGTTAAGTGGAGGCATTAAGACTGTTCCGAACATGACGCTGGAAGATGTTATACCTTTGTCTCTTGGTACCTCATTAAGAGGAGATATCATGGATATCGTGATTCCAAGGAACACTTGTATTCCTGTCAAGAAGACAAAAATATATGTGACAGCATATGATAACCAATGCAGTGTGTTGAACGAGGTTTATGAGGGTGAAAGAATAATCGCCAGCGAGAACAACTTATTGGGGTTTTTTAATCTCTCAATTCCTTGTTCACCTCGAGGTCTTCCTCATAAAGTATGCTTTGAAATAGATGCTGATGGTATTTTGAATGTCTCTTGTGAGGATGAAACTTCTGGCAATAAGAAAGATATTACGATAACTAATGAAAACGGAAGACTATCAACTGTTGAAATTCAGAGAATGATTCAAGAAGCTGAAAATTTCAAGGCTGAAGACATGAAGTTCAAGGAGAAAGTTAATGCAATAAATGCNTGA 1368 0.3947 MLLWPFKVNSDSNDKPKVVVTCKGEEKHFFAEEISSMVLTKMREFAEVFLESPVKNAVITVPAYFNDSQRRATKDAGVIAGLNVIRIINEPTAAALAYGFQKRANCVEERKIFISDLGGGTFDVSLLTIKNNAFKVMATAGDTHLGGEDFDNRMVNHFVNELKRKNKVDISENSKALRKLRTACERAKRTLSYDTEATIDIDAICQSVDFCSSITRAKFEQLNSDLFEKCMETVKGCFSDAKIDKSSIDDVVLVGGSSRIPKVQTLLQNFFSGKDIFKSINPDEAVAYGAAVQAALLSGGIKTVPNMTLEDVIPLSLGTSLRGDIMDIVIPRNTCIPVKKTKIYVTAYDNQCSVLNEVYEGERIIASENNLLGFFNLSIPCSPRGLPHKVCFEIDADGILNVSCEDETSGNKKDITITNENGRLSTVEIQRMIQEAENFKAEDMKFKEKVNAINA 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme3605g00002 455 Gene3D - 1 111 - -
Trme3605g00002 455 ProSitePatterns Heat shock hsp70 proteins family signature 3. 251 265 IPR018181 -
Trme3605g00002 455 Pfam Hsp70 protein 4 454 IPR013126 GO:0005524|GO:0140662
Trme3605g00002 455 FunFam Heat shock 70 kDa protein 301 453 - -
Trme3605g00002 455 Gene3D - 112 192 - -
Trme3605g00002 455 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 299 455 IPR029047 -
Trme3605g00002 455 PANTHER HEAT SHOCK PROTEIN 70KDA 3 454 IPR013126 GO:0005524|GO:0140662
Trme3605g00002 455 FunFam Heat shock 70 kDa 146 229 - -
Trme3605g00002 455 SUPERFAMILY Actin-like ATPase domain 2 102 IPR043129 -
Trme3605g00002 455 PRINTS 70kDa heat shock protein signature 120 130 - -
Trme3605g00002 455 PRINTS 70kDa heat shock protein signature 248 264 - -
Trme3605g00002 455 PRINTS 70kDa heat shock protein signature 280 300 - -
Trme3605g00002 455 PRINTS 70kDa heat shock protein signature 385 401 - -
Trme3605g00002 455 PRINTS 70kDa heat shock protein signature 57 77 - -
Trme3605g00002 455 PRINTS 70kDa heat shock protein signature 306 325 - -
Trme3605g00002 455 FunFam Endoplasmic reticulum chaperone BiP 14 115 - -
Trme3605g00002 455 SUPERFAMILY Actin-like ATPase domain 109 297 IPR043129 -
Trme3605g00002 455 Gene3D - 193 282 - -
Trme3605g00002 455 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 304 454 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme3605g00002 Trme-Chr3605 607 1974 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme3605g00002 4 455 Calmodulin-binding Proteins AT3G12580 67.473 0.0 618
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme3605g00002 K03283 - gmx:102667578 620.542