Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme3605g00001 ATGATTCAAGAAGCTGAAAATTTCAAGGCTCAAGACATGAAGTTCAAGGAGAAAGTTAATGCAATAAATGCTTTGGACGACTATGTTTACAATGTGAAGAAAGTTATGAAGGATAATTGTGTTAGTAATTTGCTTCCTACACAAAGGAAAAATAAGATCACTTCTCTAATATCAAAATGTGAAAATTTGCTTGATGGTGACAAGAAGGAAGAAACCTACATGTTTGTCAACATGTTGAAGGAGCTTGAGAGCATCTCTGAATTTGATCTTGGGAGCTTGAAATCATATGTTTTGAAAATTATTAATTCGGATTATAGTTAG 321 0.324 MIQEAENFKAQDMKFKEKVNAINALDDYVYNVKKVMKDNCVSNLLPTQRKNKITSLISKCENLLDGDKKEETYMFVNMLKELESISEFDLGSLKSYVLKIINSDYS 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme3605g00001 106 Pfam Hsp70 protein 1 82 IPR013126 GO:0005524|GO:0140662
Trme3605g00001 106 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 1 86 IPR029048 -
Trme3605g00001 106 Gene3D - 1 92 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme3605g00001 Trme-Chr3605 213 533 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme3605g00001 1 85 Calmodulin-binding Proteins AT5G02490 38.824 3.12e-14 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme3605g00001 - K03283 lja:Lj0g3v0328019.1 101.293