Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme36035g00001 ATGCCAAATGGAACCGACGTCGCGATAAAGCGTTTAGTTGGACAAGGAAGTGGTAGAAATGACTATGGTTTCAAAGCTGAGATAGAGACATTGGGAAGAATCAGACATAGAAACATAATGAGACTTTTGGGTTATGTTTCAAATAAGGACACAAATTTGTTGTTGTATGAGTACATGCCTAATGGTAGTTTAGGAGAATGGCTTCATGGTGCAAAAGGTTGTCATTTGAGTTGGGAAATGAGGTATAAAATTGCTGTGGAAGCTGCTAAGGGACTTTGCTATTTGCACCATGATTGTTCACCTCTTATTATTCATAGGGATGTTAAGTCTAATAATATATTGCTTGATGCTGATTTTGAGGCTCATGTTGCTGATTTTGGACTTGCTAAGTTCTTGTATGATCCTGGTGCTTCTCAATCCATGTCCTCTATTGCTGGCTCCTACGGCTACATTGCTCCAG 460 0.3957 MPNGTDVAIKRLVGQGSGRNDYGFKAEIETLGRIRHRNIMRLLGYVSNKDTNLLLYEYMPNGSLGEWLHGAKGCHLSWEMRYKIAVEAAKGLCYLHHDCSPLIIHRDVKSNNILLDADFEAHVADFGLAKFLYDPGASQSMSSIAGSYGYIAP 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme36035g00001 153 Gene3D Transferase(Phosphotransferase) domain 1 60 153 - -
Trme36035g00001 153 ProSitePatterns Serine/Threonine protein kinases active-site signature. 103 115 IPR008271 GO:0004672|GO:0006468
Trme36035g00001 153 SUPERFAMILY Protein kinase-like (PK-like) 3 153 IPR011009 -
Trme36035g00001 153 Gene3D Phosphorylase Kinase; domain 1 1 59 - -
Trme36035g00001 153 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1 153 - -
Trme36035g00001 153 Pfam Protein kinase domain 4 153 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme36035g00001 153 SMART serkin_6 3 153 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme36035g00001 153 ProSiteProfiles Protein kinase domain profile. 1 153 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme36035g00001 153 FunFam Protein kinase superfamily protein 59 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme36035g00001 Trme-Chr36035 535 994 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme36035g00001 1 153 Receptor kinase-like Gene Family AT1G75820 83.007 1.04e-87 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trme36035g00001 Pkinase 5e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme36035g00001 - - lja:Lj3g3v3375770.1 308.916