Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme36031g00001 ATGTTATCTCAGTTTCGTCATCGCCATCTGGTGTCTTTGATTGGTTATTGTGATGAAAATAATGAAATGATCCTTATATATGAATACATGGAGAAGGGAACTCTCAAGAGTCATCTATATGGTTCAGGATTCCCGAGCTTAAGTTGGAAGGAGAGACTTGAGATATGCATTGGATCTGCTAGAGGACTTCATTACCTTCACACCGGCTATTCTAAAGCAGTTATTCACCGTGACGTGAAGTCTGCAAATATCCTACTTGACGAGAACCTGATGGCTAAAGTTGCTGATTTCGGATTGTCAAAAACTGGTCCTGAGATCGATCAAACGCACGTGAGCACGGCTGTCAAGGGGAGCTTTGGGTACCTCGATCCAGAGTATTTCAGGAGGCAACAACTGACGGAAAAGTCAGACGTATATTCCTTTGGTGTAGTTCTGTTTGAAGTTCTTTGTGCAAGGCCTGTTATAGATCCATCACTTCCTAGGGAAATGGTAAACTTGGCAGAATGGGCGATGAAATTTCAGAAAAAAGGACAGTTGGAACAAATCATCGATAGAACGCTTGCAGGGAAAGTCAAACCAGATTCTCTTAGGAAATTCGGTGAAACTGCTGAGAAATGTTTGGCTGATTATGGTGTTGACAGGCCTTCAATGGGAGATGTCTTGTGGAATTTGGAGTATGCTCTTCAACTTCAAGAGGCTGTGGTTCAAGGCGATCCTGAAGACAACAGTACAAACATGATCGGCGAACTATCCCCACAGGTCAACAATTTCAACCAGGACGCGAATGTTTCGTCTGCTTCTGCTGTACAGTTCGAATCTTCTACTGTCGATGATCTTTCTGGTGTTTCTATGAGTAGGGTGTTCTCACAGTTGGTGAAGTCTGAGGGTAGATGA 894 0.4329 MLSQFRHRHLVSLIGYCDENNEMILIYEYMEKGTLKSHLYGSGFPSLSWKERLEICIGSARGLHYLHTGYSKAVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPSLPREMVNLAEWAMKFQKKGQLEQIIDRTLAGKVKPDSLRKFGETAEKCLADYGVDRPSMGDVLWNLEYALQLQEAVVQGDPEDNSTNMIGELSPQVNNFNQDANVSSASAVQFESSTVDDLSGVSMSRVFSQLVKSEGR 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme36031g00001 297 PANTHER OS07G0166700 PROTEIN 1 231 IPR045272 GO:0004714|GO:0006468
Trme36031g00001 297 Pfam Protein tyrosine and serine/threonine kinase 1 166 IPR001245 GO:0004672|GO:0006468
Trme36031g00001 297 ProSiteProfiles Protein kinase domain profile. 1 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme36031g00001 297 Gene3D Phosphorylase Kinase; domain 1 1 30 - -
Trme36031g00001 297 ProSitePatterns Serine/Threonine protein kinases active-site signature. 74 86 IPR008271 GO:0004672|GO:0006468
Trme36031g00001 297 SUPERFAMILY Protein kinase-like (PK-like) 2 225 IPR011009 -
Trme36031g00001 297 FunFam Receptor-like protein kinase FERONIA 30 245 - -
Trme36031g00001 297 Gene3D Transferase(Phosphotransferase) domain 1 31 248 - -
Trme36031g00001 297 SMART serkin_6 1 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme36031g00001 Trme-Chr36031 77 970 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme36031g00001 1 297 Receptor kinase-like Gene Family AT3G46290 85.953 0.0 548
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Trme36031g00001 PK_Tyr_Ser-Thr 1.5e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme36031g00001 - - gmx:100305416 555.058