Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme359916g00001 ATGCATGCAGAGATTCAATTGCCTTCTCCATTTGTGCCGGTTCGACAATATAGATTCCTCAGGTTTTGCAAGCAGCATGCTGAAGGTGTTTGGGTTGTGGTTGATGCTTCCATCGACTTTGGTCGGAATGGTCCCAACGGTAACCCTTACATGAGCAGTAAGAAGCTTCCATCTGGCTGTATTTTGCAGGACATGTCCAATGGTTTTTGCAAG 213 0.4601 MHAEIQLPSPFVPVRQYRFLRFCKQHAEGVWVVVDASIDFGRNGPNGNPYMSSKKLPSGCILQDMSNGFCK 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme359916g00001 71 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 71 IPR042160 -
Trme359916g00001 71 SUPERFAMILY Bet v1-like 1 71 - -
Trme359916g00001 71 ProSiteProfiles START domain profile. 1 71 IPR002913 GO:0008289
Trme359916g00001 71 Pfam START domain 1 71 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme359916g00001 Trme-Chr359916 47 259 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme359916g00001 1 71 Homeobox Transcription Factor Family AT3G61150 64.789 2.96e-27 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme359916g00001 K09338 - tpra:123905936 110.923