Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme35973g00001 ATGGAGAATATGGCGTTTTTCTTTTCTGAACTCAGCTTGACACAATATTCTATTATGTGTGACTATAAACCTTCTACAATTGCCGCTTCTGCGGTGTATTGCGCGAGAATTGTTCTTGGAAGATACCCTTTTTGGAGCAATGAATTGAAGATGTGTACAGGGTATTCCGACGAGAAGTTATTGTGCTGTGTCAAGGTTATGATGGAACTATGCTATGAAACTTGTAAAGAAGGAACCATGGAAGTTTTCAAGAAGTTTTCAAGTTTATATAAATCTAGGGTTTCATGTATTGCTCAGGAAATTTTCCAAGAAGCTTTCTTATCTTAG 327 0.367 MENMAFFFSELSLTQYSIMCDYKPSTIAASAVYCARIVLGRYPFWSNELKMCTGYSDEKLLCCVKVMMELCYETCKEGTMEVFKKFSSLYKSRVSCIAQEIFQEAFLS 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme35973g00001 108 SUPERFAMILY Cyclin-like 1 99 IPR036915 -
Trme35973g00001 108 Gene3D - 1 106 - -
Trme35973g00001 108 Pfam Cyclin, C-terminal domain 1 96 IPR004367 -
Trme35973g00001 108 SMART Cyclin_C_2 1 100 IPR004367 -
Trme35973g00001 108 SMART cyclin_7 1 69 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme35973g00001 Trme-Chr35973 512 838 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme35973g00001 1 87 Core Cell Cycle Gene Families AT2G26760 42.529 3.30e-19 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme35973g00001 K21777 - twl:119990905 89.7373