Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme35955g00001 ATGCACTACATAAGTCGATTCATAGCTGGGTTTACAATTGGTTTTGTGAGAGTGTGGCAGATTAGTTTAGTCACACTTTCAATTGTTCCATTGATTGCCCTTGCTGGAGGTCTTTATGCATATGTCACTATTGGCCTCATTGCAAAAATTAGAAAAGAATATGTCAAGGCTGGTGAAATTGCTGAAGAG 189 0.3862 MHYISRFIAGFTIGFVRVWQISLVTLSIVPLIALAGGLYAYVTIGLIAKIRKEYVKAGEIAEE 63
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme35955g00001 63 PANTHER ABC TRANSPORTER B FAMILY 1 63 IPR039421 -
Trme35955g00001 63 Gene3D ABC transporter type 1, transmembrane domain 1 63 IPR036640 GO:0005524|GO:0016020
Trme35955g00001 63 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 63 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Trme35955g00001 63 Pfam ABC transporter transmembrane region 2 63 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Trme35955g00001 63 SUPERFAMILY ABC transporter transmembrane region 4 63 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme35955g00001 Trme-Chr35955 221 409 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme35955g00001 1 63 Calmodulin-binding Proteins AT2G36910 42.857 5.17e-14 62.4