Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme35886g00001 TGGGTGGCTTTTAAAACTAAGAAAGTTGGTTCAATTGATGATGATATTGTCAACCGTGCGATTATTTATGCTTCTGGCCTTCCATTAGCTATAGATGTCATAGGTTCGAATTTGTCAGGAAACCCTATAGCAGAATGGAAATCTATGTTAGATCAATATAAAAGGATTCCGCCTAAAGATATGCAAAATATACTAAAAGTAAGCTTTGATGATTTGGATGAAGAATCGAAAAATGTCTTTCTAGATATTGCTTGTTTCTTTAAAGGGTGTAGACTGGAAGAGTTCGAAGCCGTTGTGATCGGACTCTATTATGGATTTCTAAGCACACTTTCCTCCACGCGGCATTGCTCCGTCCAAGAAATCCGCGCAGCGGAAGATCCTGAATTTGAGAGACATAAAATCAGGAAATGTAACCGAGGGAAAGGGGTTTGTGCACCAATATCTGCCATAAAAGGGAACTAG 462 0.3918 WVAFKTKKVGSIDDDIVNRAIIYASGLPLAIDVIGSNLSGNPIAEWKSMLDQYKRIPPKDMQNILKVSFDDLDEESKNVFLDIACFFKGCRLEEFEAVVIGLYYGFLSTLSSTRHCSVQEIRAAEDPEFERHKIRKCNRGKGVCAPISAIKGN 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme35886g00001 153 Gene3D - 2 73 IPR042197 -
Trme35886g00001 153 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 83 IPR027417 -
Trme35886g00001 153 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 97 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme35886g00001 Trme-Chr35886 229 910 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme35886g00001 10 89 WRKY Transcription Factor Family AT5G45050 37.500 9.95e-11 57.0