Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme35806g00001 ATGAGAGATTGTTCTTCAGCTGGAACACCAGAATGGATGGCTCCTGAACTGATTCGAAATGAACCATTCACTGAAAAATGTGATATCTTTAGCCTAGGGGTGATAATGTGGGAGCTCTGCACCTTGAATAGGCCGTGGGAAGGCGTACCTCCAGAGAGGGTGGTTTATACTGTTGCTAATGAGGGTTCAAGATTGGAGATTCCTGAAGGCCCACTAGGCAGGCTGATTTCAGAGTGTTGGGCAGAACCGAATGAGCGACCAAGTTGTGAGGAGATCCTATCTCGCTTGGTGGACATCGAGTACTCAATGTCTTGA 315 0.4762 MRDCSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLNRPWEGVPPERVVYTVANEGSRLEIPEGPLGRLISECWAEPNERPSCEEILSRLVDIEYSMS 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme35806g00001 104 Pfam Protein tyrosine and serine/threonine kinase 9 96 IPR001245 GO:0004672|GO:0006468
Trme35806g00001 104 ProSiteProfiles Protein kinase domain profile. 1 101 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme35806g00001 104 Gene3D Transferase(Phosphotransferase) domain 1 2 104 - -
Trme35806g00001 104 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 6 96 - -
Trme35806g00001 104 SUPERFAMILY Protein kinase-like (PK-like) 5 96 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme35806g00001 Trme-Chr35806 5 586 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme35806g00001 1 103 MAP Kinase Kinase Kinase AT3G58640 82.524 6.84e-58 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Trme35806g00001 PK_Tyr_Ser-Thr 6.9e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme35806g00001 - - gmx:100807193 212.231