Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme35804g00001 GGTGAAGGCGGAACAAGTATAACTCCAAAAGATATTCCAAACATCCCGTTGCACAAATTTCAATTCAAGTCATTCTCAGACATCAAACGTGGCAAATATCAGGCTGATTCCTTAGTTGGAGCTGTTAATGATGTTGGAGCTGTTAAACCAAGTACCGCTGGAAAGAAGTATCCCACAACTTTCAGATTAGTTGATGCAAGTTTGGAAACTATGCTGGTTACTTTGTGGGGAGTATTTGGATCAACCTTCACACAGAATTTTAATGAGCATGGGAATAGCGGACCATTTATTGTTGTACTCAAACATGCTAAAATCAAGGAGCCTGAAGGCCAATATGAGCTCACTGTTACAAATGCTTGGAACGGTACAAAGCTTATTGTAGATCAAGAGGTGAAAGAAATCAAAGATTTCATCAAGACTTTGCCTGAGAATTACACTGTTCCATCTACCAGTCAACAGGGTGGATAWAAACAGGGTGAATTCACAGTTTGA 492 0.3963 GEGGTSITPKDIPNIPLHKFQFKSFSDIKRGKYQADSLVGAVNDVGAVKPSTAGKKYPTTFRLVDASLETMLVTLWGVFGSTFTQNFNEHGNSGPFIVVLKHAKIKEPEGQYELTVTNAWNGTKLIVDQEVKEIKDFIKTLPENYTVPSTSQQGGXKQGEFTV 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme35804g00001 163 SUPERFAMILY Nucleic acid-binding proteins 20 146 IPR012340 -
Trme35804g00001 163 Gene3D - 13 147 IPR012340 -
Trme35804g00001 163 CDD RPA1_DBD_B_like 38 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme35804g00001 Trme-Chr35804 1 835 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme35804g00001 15 151 Core DNA Replication Machinery Family AT4G19130 25.170 2.92e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme35804g00001 - K24740 tpra:123884216 116.316