Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme35779g00001 ATGGACCCTTTTCTTGAAGTGAATGTTTCATTAAAGAATCGTCCTCTTCCATTACCAGATATTGTTCTTCCTAAATACGGAGGCTTTGAAAATCGTTGTCTGATGTCGGAAGGTCCTGCTAGTACACGTATTGGATCCATTTCAATGGATCTTGGAGATACCAGNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNGATGATGCACCACCTTCTCCATGTGTTGAGATACGAAGGTTGATGGGAGGTGATAGATTTTTTCTCAAAGGTGAAGAAAATGACGTAAATTCTGTATCATTAGTTCTCCGGATAACTAATCAAGGCGGGCGAGCAAGAAATATCCATTTCATATTCTACCTCGATACTGATACGGCCATCTCAGTGTCAAGTGAAATGGTTGAGCAACTTGAACTTACCGAGCACAATGTTAAATTCATTGCCGAGTTGATTGATTTGTTATTGGCAACATTGGTTCCTGATTGGAAACCTTGTGTAGCGATTGATCACTTAATTTCTCCAAATGGTAAACGAACTCCTCTAAACCTACAGAAACAAGACTCGCAATTGGCAAGATACAAACTAAGTTCAGTGGATTCTAGCGAAATTGTGGCTGAATATTTAGGTCCCTCAACCTCACATGACAGATTGGCTGAAAAAGAAAACAGTGATAATATGATTTTTTATGATGTTCTATCCCATGCAAACATTGGTTTCCAAAGAACAACGAAGACAGATGATTTGTATTCTGCGACATCTTATGCTTCAGCAACATCTGACTTCAATGATAAGAATTATTCTACAGTTTCATTTGTGTCTGCTAACTCAGGATACACAGATTTCAGCTTACCTACAGTGAATGGATGGAGTCAATCCTCACTT 882 0.3719 MDPFLEVNVSLKNRPLPLPDIVLPKYGGFENRCLMSEGPASTRIGSISMDLGDTXXXXXXXXXXXXXDDAPPSPCVEIRRLMGGDRFFLKGEENDVNSVSLVLRITNQGGRARNIHFIFYLDTDTAISVSSEMVEQLELTEHNVKFIAELIDLLLATLVPDWKPCVAIDHLISPNGKRTPLNLQKQDSQLARYKLSSVDSSEIVAEYLGPSTSHDRLAEKENSDNMIFYDVLSHANIGFQRTTKTDDLYSATSYASATSDFNDKNYSTVSFVSANSGYTDFSLPTVNGWSQSSL 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme35779g00001 294 Gene3D - 97 169 - -
Trme35779g00001 294 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 85 186 - -
Trme35779g00001 294 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 99 152 IPR024678 GO:0004674|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme35779g00001 Trme-Chr35779 1 965 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme35779g00001 1 179 MAP Kinase Kinase Kinase AT1G49160 54.190 1.34e-59 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme35779g00001 K08867 - gmx:121175054 371.703