Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme35760g00001 CAGATTCATAACATATGCTCTGATGCTGAAGACATATTGGATGGATTTGAGTTGCAAAACAAGAGAAAGCAAGTTGTGGAAGCTTCTGGCAGCACTTGGATGAAGGTACGCCACTTCTTTTCTTCCTCTAATCCACTTGCTTTCCGATTTAAATTGGCACATCAAATCAAAGAGATCAAGGATAGATTGAATAAGGTAGCAGCCGATGGAACTGGGTTTGGACTTGTGAGAATGGATGTTGAGCCTAGACTTGCTGTGCAAAGGAGAGAATTCACTCATTCCCATGTTGATGCTTCAAGTGTAATTGGGAGGGAGAATGACAAAGAAGCCATTATCAAGCTTTTGATGGAATCCAATCCTCGCGGTGGCGGTGATAAATGTATGTGTGTCATTCCCATTGTGGGAATCGGAGGACTGGGGAAGACCACCCTTGCAAAGGTGGTATTCAATGATAAGAGGATAGATGAAGTTTTCCAGTTGAAGATTTGGGTGTGTGTCTCCAACAATTTTGATATTAGGCAAATAATTATCAAAATTATCAACTCTGCCTTCCTTTCAGCTTCACCTCCACCTGGTGTTGCTATTCCTCACCAAGAAGATATTAACCACTTTGATATTGAGCAACTGCAAATTCGTCTAAGACATATACTTGATGGTCAAAAGTTTATCCTCGTGCTAGATGATATATGGAATGATGATCGCACGAAATGGATTGAGTTGGCTGATATGATCAAAGTTGGTGCAAGAGAAAGTAAAATCATAGTGACGACGCGTAGCAACTCAATCGCTTCCATGATGGGTACTGTTCCTTCATATGTTTTGGAAGGTCTTTCGTTAGAGAATTGTTTGTCTCTATTTGTGAAATGTGCATTCAAGGATGGAGAAGAAGAAAAATATTCAAATCTAGTTGAGATCGGTAAAGAAATTGTGAAAAAATGTGCAGGAGTTCCGTTGGCCGTCAGAACATTAGGAAAAGAAAGGTGA 984 0.4024 QIHNICSDAEDILDGFELQNKRKQVVEASGSTWMKVRHFFSSSNPLAFRFKLAHQIKEIKDRLNKVAADGTGFGLVRMDVEPRLAVQRREFTHSHVDASSVIGRENDKEAIIKLLMESNPRGGGDKCMCVIPIVGIGGLGKTTLAKVVFNDKRIDEVFQLKIWVCVSNNFDIRQIIIKIINSAFLSASPPPGVAIPHQEDINHFDIEQLQIRLRHILDGQKFILVLDDIWNDDRTKWIELADMIKVGARESKIIVTTRSNSIASMMGTVPSYVLEGLSLENCLSLFVKCAFKDGEEEKYSNLVEIGKEIVKKCAGVPLAVRTLGKER 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme35760g00001 327 PRINTS Disease resistance protein signature 313 327 - -
Trme35760g00001 327 PRINTS Disease resistance protein signature 130 145 - -
Trme35760g00001 327 PRINTS Disease resistance protein signature 216 230 - -
Trme35760g00001 327 Pfam NB-ARC domain 104 324 IPR002182 GO:0043531
Trme35760g00001 327 Gene3D - 276 326 IPR042197 -
Trme35760g00001 327 PANTHER DISEASE RESISTANCE PROTEIN RP 4 324 IPR044974 GO:0006952
Trme35760g00001 327 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 87 325 IPR027417 -
Trme35760g00001 327 Gene3D - 85 271 IPR027417 -
Trme35760g00001 327 FunFam Probable disease resistance protein At1g61300 85 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme35760g00001 Trme-Chr35760 1 1058 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme35760g00001 133 326 WRKY Transcription Factor Family AT5G45050 27.586 8.99e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme35760g00001 - - gmx:100795479 462.225