Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme35728g00001 GCTGTGCCAAAGAAAATACTTGATTTGATGAATGTCCCTGGTTTGACTAGAGAAAATGTTGCGAGTCATTTGCAGAAATTTAGACTTTATTTGAAGCGATTAAGTGGAGTGGCACAGCAACAGAATGAGATGCTAAACACAGTTCCTGGGACTATAGAATCCAAGCTAGCTGCTGCTGAAAGATACATACAAACTGTGGCTGCTTCTGGCTATGTTTCACCTGAAACACTTGCAGCCCTTCATGCTGAACTCTTAGGTCACCCGGTAACTAACATAGTGCCTACAGTGGACAGGACTACGCTAATGCAAGCATTTGTACAGGAGCCAAAACACTCTGGTGCCGATGACCATGCTGTAGCATCTGGTCAGCCTCTTGTAAAATGTCCTTCCAACATTGTCAATAATTTCCCTCAGTCCATCTTAAAAGTAGATAATTCATCATTAGGATATGGAGCATGGCCGCCATCTAATACACTTGGTTCAGTCTCAAGGGGAAGGTTAGGTGTTCAGAATAATAACACGGTGATTGATATATTGCAGCACCAACAAAAGCACCAGCATCAACAAAAACANNNNNNNTCACCGATACATGATCAAAATCGATCAATCAATGTTCAACCATCGTGCTTAGTGGTTCCTGCTCAATCTTCTGACACTTTCCAGGAAGTAAAATCTGTTGCTTCTGTCAACAAGGATTGCAGTTTCGGCAGAAATGCCATTATTGATTATAGTCAACAATCACAAAAATCAAATATTTCATCCAGTACATCTCAATATCTTGGCAGGGACACCAAATCTACCTCCATTTCTCCTCTAATGTCCTCTTTTTCAGTCGGCTCCAGCAATAGCAATATTCAGCAGATTCAAAACTCAACTTCAACATTTGGTGCTGCGAGACCATTGCCTAGCCTTCTCCCCA 919 0.4146 AVPKKILDLMNVPGLTRENVASHLQKFRLYLKRLSGVAQQQNEMLNTVPGTIESKLAAAERYIQTVAASGYVSPETLAALHAELLGHPVTNIVPTVDRTTLMQAFVQEPKHSGADDHAVASGQPLVKCPSNIVNNFPQSILKVDNSSLGYGAWPPSNTLGSVSRGRLGVQNNNTVIDILQHQQKHQHQQKXXXSPIHDQNRSINVQPSCLVVPAQSSDTFQEVKSVASVNKDCSFGRNAIIDYSQQSQKSNISSSTSQYLGRDTKSTSISPLMSSFSVGSSNSNIQQIQNSTSTFGAARPLPSLLP 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme35728g00001 306 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 290 IPR044841 GO:0003700|GO:0006355
Trme35728g00001 306 NCBIfam myb-like DNA-binding domain, SHAQKYF class 1 29 IPR006447 GO:0003677
Trme35728g00001 306 Gene3D - 1 35 - -
Trme35728g00001 306 SUPERFAMILY Homeodomain-like 1 33 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme35728g00001 Trme-Chr35728 1 1017 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme35728g00001 1 91 Response Regulator Gene Family AT2G01760 55.914 2.14e-22 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Trme35728g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme35728g00001 - K14491 gmx:100817125 357.066