Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme35671g00001 TCCATGCCAGCATCTGGAATGAACACAGTGGTTCCTAATACAAGTCAGCTTACCATCTTCTATAATGGGAGTATTTGTATCTATGATGGAATACCTGCAGAAAAGGTGCAGGAAATAATGCTCATGGCTGCTGCTGCTGCCAAGTCTACTGAAACGAAGAAGATTGTGAAACAATCTCCCGTCCCTTCACCTGCTCCAACAAGGCCTTCTTCTCCACATGGAACCACTGATAATATTGCTTCACAGCAGGGACTCTGCTATCCTGCAAAGAAGAGTTCCATCTGCAGGCTGCAAG 295 0.4576 SMPASGMNTVVPNTSQLTIFYNGSICIYDGIPAEKVQEIMLMAAAAAKSTETKKIVKQSPVPSPAPTRPSSPHGTTDNIASQQGLCYPAKKSSICRLQ 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme35671g00001 98 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 11 83 IPR040390 -
Trme35671g00001 98 ProSiteProfiles Tify domain profile. 10 45 IPR010399 -
Trme35671g00001 98 SMART tify_2 10 45 IPR010399 -
Trme35671g00001 98 Pfam tify domain 12 44 IPR010399 -
Trme35671g00001 98 MobiDBLite consensus disorder prediction 51 84 - -
Trme35671g00001 98 MobiDBLite consensus disorder prediction 70 84 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme35671g00001 9 96 Tify Gene Family AT5G20900 47.727 1.29e-16 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Trme35671g00001 tify 1.7e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme35671g00001 K13464 - gmx:100306045 130.183