Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme35660g00001 TGGTCTCTTGGCGCTATAATGTATGAGATGCTTGTCGGTTATCCTCCATTTTATTCTGATGATCCTGTAACAACATGCAGAAAGATTGTGCACTGGAAAAATCACTTAAAATTTCCGGACGAGGCAAGATTAACACCTGAAGCAAAAGATCTGATATGCAGGTTGCTTAGTGGTGTTCCGCATAGACTTGGTACAAGAGGAGCGAATGAAATTAAAACTCATCCGTGGTTTAGAGATGTCATATGGGACAGACTCTATGAAACCGAGGCAGCATTTAAACCACGAGTCATTGGAGAACTTGACACTCAAAATTTTATGAAATTCGATGAGGTTGAACCACCAAAGCCATATCGAACTGGATCTGGACCGATCAGAAAGATGCTCTTGACTCCTCAAGATCTCAGTTTTGTTGGCTATACATATAAGAATTTTGCCGCTGTCAAGGGGAAA 450 0.4111 WSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPDEARLTPEAKDLICRLLSGVPHRLGTRGANEIKTHPWFRDVIWDRLYETEAAFKPRVIGELDTQNFMKFDEVEPPKPYRTGSGPIRKMLLTPQDLSFVGYTYKNFAAVKGK 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme35660g00001 150 ProSiteProfiles AGC-kinase C-terminal domain profile. 78 150 IPR000961 GO:0004674|GO:0005524|GO:0006468
Trme35660g00001 150 Gene3D Transferase(Phosphotransferase) domain 1 1 97 - -
Trme35660g00001 150 ProSiteProfiles Protein kinase domain profile. 1 77 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme35660g00001 150 PANTHER MYOTONIC DYSTROPHY S/T KINASE-RELATED 1 119 - -
Trme35660g00001 150 SMART pkinase_C_6 78 143 IPR000961 GO:0004674|GO:0005524|GO:0006468
Trme35660g00001 150 SUPERFAMILY Protein kinase-like (PK-like) 1 126 IPR011009 -
Trme35660g00001 150 Pfam Protein kinase domain 1 77 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme35660g00001 Trme-Chr35660 211 1097 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme35660g00001 1 149 AGC Kinase Gene Family AT4G33080 75.333 7.85e-82 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Trme35660g00001 Pkinase 2.9e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme35660g00001 K08790 - gmx:100802177 283.878