Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme3556g00001 ATGTCGTCTCATGATTCACGTATCACGGCAATGAATTGCATGTTTATAGGTGCAGCTGATTTTCTTATCAAACCTGTTCGGAGGAATGAGCTTACGAACTTATGGCAGCATGTATGGAGAAAGCATGTTATTAACAGGCCTCTCCAAAATACAACATCTGCACAAAAGAATCTTAAAATTGCCACAGAAGACAATTTTGCTGGCAATCAATCAACTGATTCTGTTTCTGTGGCTTCCTCACAGAAAAATGATAAATGCAGTGAGAAATTGAGCAAGGCCCAAAGCACATGCACACTGCCATTTTCTGATGCTGAGAATGCATACATGGATAATATGCAAAATGCCTCTCAGGTGAAGTGTTCTTTGAAATTAAGCAACATTGATGTGTTGAAGCATGAAGAGTCTAACATAATTATACGGGAATCTACTAAGCATAATGATGAAACAGAAGATTCAAGGCTAGAACAAGATTTCAGTACTGCTGAAATTGAACCCAAAAGTGAAATACTTAAAGCTGAGTTAAGCAGAGAGAACCCTGATATTGATACCGAAGTACGCGGATGCAGTGATGAACTGATAGAACCTTCTAGAAGAGCTATTGACTTGATTTCCACATTTGGGAAATCAAACAAGCAAGCAAGTGAATTTTCTGGCAGCACATGCAAACAAGCAAGTGAAGCATCTGAGGAACGACAAAGATTGAACCTCTCAAATACTTCTGCCTTTTCCCGGTGA 735 0.3918 MSSHDSRITAMNCMFIGAADFLIKPVRRNELTNLWQHVWRKHVINRPLQNTTSAQKNLKIATEDNFAGNQSTDSVSVASSQKNDKCSEKLSKAQSTCTLPFSDAENAYMDNMQNASQVKCSLKLSNIDVLKHEESNIIIRESTKHNDETEDSRLEQDFSTAEIEPKSEILKAELSRENPDIDTEVRGCSDELIEPSRRAIDLISTFGKSNKQASEFSGSTCKQASEASEERQRLNLSNTSAFSR 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme3556g00001 244 ProSiteProfiles Response regulatory domain profile. 1 39 IPR001789 GO:0000160
Trme3556g00001 244 MobiDBLite consensus disorder prediction 210 244 - -
Trme3556g00001 244 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 126 IPR045279 GO:0009736
Trme3556g00001 244 SUPERFAMILY CheY-like 1 51 IPR011006 -
Trme3556g00001 244 Gene3D - 1 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme3556g00001 Trme-Chr3556 165 1438 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme3556g00001 1 121 Response Regulator Gene Family AT5G24470 37.600 9.88e-17 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme3556g00001 K12130 - gmx:100779346 237.269