Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme354g00001 AGTGAAGAATCAGAAAAGTTCGGACCAGTATATGTTCGTAATAAGCTTCTTAGTGAGTTACTGAAGCGAGAAGTTACGGCATCTGATGTTCATGGACTACAGACATTCATCAAGAGGAGGCTCAAAGTAGGCTCATTATCACAACTGAGAGACAGGCACGCGCTCAGTGGAAAAGTTGATGAGATATATGAAGTCGCACCATGGAAGCTTAAAGACTCTCTAAAGCTTTTTAGCTTAGCAGCCTTCAAGCAAAGCCATCCTAGAAATGGTTACCAGGGTTTCTCAGAAAGGGCAGTTGAATATGCAGGAGTTCAAGAAGATTATAATGACCGAGGAAAGCGTAGCCGACTGATGAATGCTAAAGACATCCTTGATGTACTTAGACATAACAAGGGGGCTGATGCAATTGAAGGAATAATATTTGATTTATCTCAAAAAGTAGATTTACGTTTTCGAGCTGGCAGATTCAACTTGATGAGTAAATTAAGATTTCTTAAATTCCACATCCCCTCGGGTAAGAAGAGATTGGGCACCGTGCATCTTCCTGAAAATATTATGCCATTTTTGGACAAATTGACATACCTTGAGTGGAATGGGTATCCCTTGAAGTCTCTTCCACAACCTTTTCGTGCTGAGCAATTAATTCAGATTTGTTTGCCGCACAGCAAAATTCAACATCTTTGGTGCGGGGTGCAGGAACTTGTGAATTTAGAGGCAATCGACCTAAGTGAGTGCAAACAGTTGATCAACTTCCCTGATTTGTTCGGGGTGTTAAAACTCAAACATTTGCGCCTTTCTGGTTGTGAAAATTTATGTGAAGTTCAAGCTTCTGCTTTTTCTAAGGACACACTTGATACTTTGCTACTGGATAGGTGCACAAAATGGCAAAGTCCGATGGGTGAGAAGCATTTAAAATCTCTAGCGAACTTCAATGTCAAAGGCTGCTCAAGTCTGCAAGAGTTTTCACTGTCCTCGAATTCAATAACAGGGTTGGATTTAAGCAATACAGGAATCGAAATATTGCACCCATCAATTGGTGGCATGAATAAGCTTAGTTGGTTGAATCTAGAAGATTTAAATCTAACAAATCTACCGATTGAGTTGTCTCGCTTGAGATCACTTACTGAACTTCGGACTGTCCCCCAAGAGGAGACTAGAAGCGATAGGCAACAAGGAGGAAGACATCATCGAGGAGGAGAGAGATCCAGAGAAAAGGCCTTTCGTAGCAACTATCACGGGAGGGACGCACTAAAAACGGGAACACCACATCTTCTGAAATACGAAGAGCACCCCATCATCTTCAATGACAACAAATATCCCGAAGTAAGGGAATGCCACCAACAGGCCAGCAGAATAACGGCAAAAGAGCCCGGAAACGATGGATAA 1386 0.4199 SEESEKFGPVYVRNKLLSELLKREVTASDVHGLQTFIKRRLKVGSLSQLRDRHALSGKVDEIYEVAPWKLKDSLKLFSLAAFKQSHPRNGYQGFSERAVEYAGVQEDYNDRGKRSRLMNAKDILDVLRHNKGADAIEGIIFDLSQKVDLRFRAGRFNLMSKLRFLKFHIPSGKKRLGTVHLPENIMPFLDKLTYLEWNGYPLKSLPQPFRAEQLIQICLPHSKIQHLWCGVQELVNLEAIDLSECKQLINFPDLFGVLKLKHLRLSGCENLCEVQASAFSKDTLDTLLLDRCTKWQSPMGEKHLKSLANFNVKGCSSLQEFSLSSNSITGLDLSNTGIEILHPSIGGMNKLSWLNLEDLNLTNLPIELSRLRSLTELRTVPQEETRSDRQQGGRHHRGGERSREKAFRSNYHGRDALKTGTPHLLKYEEHPIIFNDNKYPEVRECHQQASRITAKEPGNDG 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme354g00001 461 MobiDBLite consensus disorder prediction 379 412 - -
Trme354g00001 461 SUPERFAMILY L domain-like 156 377 - -
Trme354g00001 461 Gene3D Ribonuclease Inhibitor 140 395 IPR032675 -
Trme354g00001 461 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 109 366 IPR044974 GO:0006952
Trme354g00001 461 MobiDBLite consensus disorder prediction 379 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme354g00001 Trme-Chr354 115 2771 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme354g00001 105 377 WRKY Transcription Factor Family AT4G12020 33.451 9.52e-29 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme354g00001 - - psat:127076353 422.935