Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme35464g00001 GTTTGTGATTTTGGGCTTTCCCGCTTAAAGGCCAATACATTTCTCTCTTCCAAGTCAGCTGCTGGGACTCCTGAGTGGATGGCTCCAGAAGTTCTTCGCGACGAGCCATCAAATGAGAAGTCTGATATTTACAGCTTTGGAGTAATCATGTGGGAGCTTGCAACATTGCAACAGCCGTGGGGTAATTTGAACCCGGCACAGGTTTGTTGTCTCTACCTACAGTACCATTATTTACAGTATGCTTAA 246 0.4553 VCDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDIYSFGVIMWELATLQQPWGNLNPAQVCCLYLQYHYLQYA 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme35464g00001 81 SUPERFAMILY Protein kinase-like (PK-like) 1 76 IPR011009 -
Trme35464g00001 81 Pfam Protein tyrosine and serine/threonine kinase 1 70 IPR001245 GO:0004672|GO:0006468
Trme35464g00001 81 Gene3D Transferase(Phosphotransferase) domain 1 1 78 - -
Trme35464g00001 81 ProSiteProfiles Protein kinase domain profile. 1 81 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme35464g00001 81 PANTHER SERINE-THREONINE PROTEIN KINASE 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme35464g00001 Trme-Chr35464 617 959 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme35464g00001 1 70 MAP Kinase Kinase Kinase AT5G03730 92.857 3.41e-41 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Trme35464g00001 PK_Tyr_Ser-Thr 9.4e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme35464g00001 K14510 - rcu:8288382 143.665