Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme35410g00001 ATGCAAGAATTACTGGCTCGAAGAAAAGAGGCGGAAGAGAGAAAGAAAAGAGAAGAGGAAGAGAAGTTAAGGAAAGAAGAAGAGGAGAGACAAAGGATAGAGGAACTTGAGAGACAGGAAGAAGAGGCTAAACGTATAAAGAAGGAAAAAGAAAAGCAAAAACTACCGGAAAAGAAGCAGAGACAAGAAGCGCGACGTTATGAGGCAATGAGAAGGCAGATTATCAATAGCATGGGGGTTGTGAATCTTCCTGTTGGGGAGGACACTGGTGCACCKGCTAAGAAACCTATTTATCGGACAAGGAAAGGGAGATCAACTAATCGAAATCATAATGSTGAAGCTTCTGTCAAGATAGATGAAAGTGGTGAGGCAAAGGAAACTATAACTGATTTAGATTCAGAGGAACCGTCGGTGCAGATGGACGACAATGTTGAACTTCCTGAAGCTGTTGAAGAGGATGTTGAGGATGCATGGGATGAAAGAAGCTGGGATGATAGGGGTGCATTTGCTGATGAAGAAGTTGTGCATCTGAATGCTGGTGCTATGAATAAAACTGTTTCGAAGCCTGCGGTTGAAGAAACTGAAGATAGAGAACAGGCCAAAGTTGTGGTTGAGGACAAAAAGATAAATCACAATCCACAACAGTCTGCTGTGTCTTCTAGTCCGAGTGATGGGAACAACCTCCGGTCGCCAATTTGTTGCATCATGGGTCATGTGGACACTGGAAAAACCAAGCTTCTGGATTGTATTCGAGGTACCAATGTTCAAGGAGGCGAAGCTGGCGGTATCACCCAGCAGATTGGCGCAACATACTTTCCTGCTGAGAACATACGCGAAAGAACTAAGGAACTGAAAGCTGATGCAANNCTGAAAGTTCCCGGTCTACTAGTTATTGATACCCCAGGCCACGAATCGTTCAATAACTTAAGGTCTCGGGGTTCAGGTCTATGTGATATTGCAATTTT 965 0.4383 MQELLARRKEAEERKKREEEEKLRKEEEERQRIEELERQEEEAKRIKKEKEKQKLPEKKQRQEARRYEAMRRQIINSMGVVNLPVGEDTGAPAKKPIYRTRKGRSTNRNHNXEASVKIDESGEAKETITDLDSEEPSVQMDDNVELPEAVEEDVEDAWDERSWDDRGAFADEEVVHLNAGAMNKTVSKPAVEETEDREQAKVVVEDKKINHNPQQSAVSSSPSDGNNLRSPICCIMGHVDTGKTKLLDCIRGTNVQGGEAGGITQQIGATYFPAENIRERTKELKADAXLKVPGLLVIDTPGHESFNNLRSRGSGLCDIAI 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme35410g00001 321 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 228 321 IPR000795 GO:0003924|GO:0005525
Trme35410g00001 321 Pfam Elongation factor Tu GTP binding domain 232 321 IPR000795 GO:0003924|GO:0005525
Trme35410g00001 321 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 2 321 IPR015760 -
Trme35410g00001 321 Coils Coil 1 53 - -
Trme35410g00001 321 MobiDBLite consensus disorder prediction 1 70 - -
Trme35410g00001 321 MobiDBLite consensus disorder prediction 83 135 - -
Trme35410g00001 321 MobiDBLite consensus disorder prediction 113 132 - -
Trme35410g00001 321 Gene3D - 223 321 IPR027417 -
Trme35410g00001 321 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 229 321 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme35410g00001 Trme-Chr35410 1 1070 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme35410g00001 54 321 Eukaryotic Initiation Factors Gene Family AT1G76810 46.440 4.45e-65 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme35410g00001 K03243 - gmx:100814875 317.775