Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme3535g00001 ATGGATACAGCGCCCGGTGATGCGTCTAATCCACCTCCTCTGAAAATACCATCTACGGCACCTCCTGCTAAAGAGGATGATGGTCAAGATTCTGCTGCTGTAGTCTCTGGACAAGATAATACTGCACGTGAAGCACCATCTAGGCTATCTCCTACCGGCATATCTTCTTGGGCCAAAAATTTAAAACTTTCTCAGTCATTTTCTGGTAACCAAGATGATTCTTCAAGTGAAAATGTTGGGAAATCAACGTTTGCACGCTTTACAAGTAATCTGGGATTGCGGTTGTCTCCAAAATCTCCTGTGGTAGATGACAGTTCCAATGAACCGGCAGCACAATCTAATTTGTTTGGAAGTATCACAAAAGGTCTGGTAGACTCTTCGAAGAATGCGGTGAAAGCTGTGCAGGTCAAAGCGCGGCACGTTGTTTCTCAAAACAAACGCAGATACCAGGAGGGAGGTTTTGATTTAGATATGACATATATCACAGAAAACATTATTGCAATGGGGTTCCCTGCTGGTGACATGAGCTCTGGGTTTTTTGGTTATGTTGAAGGATTTTACAGAAATCATATGGAAGAAGTGATCAAGTTTTTTGAGACTCACCACAAGCAAACCTGTTTACTGTTGTACATGTTGCAATTTCTTCCTCCCTCCCTCCCTTTCTGGATGTCAACGGGGAGGGGGCGGGAAGTACTCCCTCACTCCCCATTCCAGCCATCCAAAATACTCCCCATCCCCGTTGCCATTCCCCGCTTCGGGGAGAATTTTCACCCATCCCCGTGGATCCCCACG 792 0.4583 MDTAPGDASNPPPLKIPSTAPPAKEDDGQDSAAVVSGQDNTAREAPSRLSPTGISSWAKNLKLSQSFSGNQDDSSSENVGKSTFARFTSNLGLRLSPKSPVVDDSSNEPAAQSNLFGSITKGLVDSSKNAVKAVQVKARHVVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGFYRNHMEEVIKFFETHHKQTCLLLYMLQFLPPSLPFWMSTGRGREVLPHSPFQPSKILPIPVAIPRFGENFHPSPWIPT 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme3535g00001 264 MobiDBLite consensus disorder prediction 33 54 - -
Trme3535g00001 264 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 136 203 IPR029021 -
Trme3535g00001 264 MobiDBLite consensus disorder prediction 1 54 - -
Trme3535g00001 264 Gene3D Protein tyrosine phosphatase superfamily 132 214 IPR029021 -
Trme3535g00001 264 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 124 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme3535g00001 Trme-Chr3535 129 1917 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme3535g00001 33 203 Protein tyrosine phosphatase (PTP) family AT3G19420 69.540 2.03e-79 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme3535g00001 K01110 - ccaj:109817587 341.658