Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme35277g00001 ATGTTGACGCCTAATCGATGTTCAATACTATTGTACCTTTTACAGGTTGCCAAAGAAAATGCTGACGTGATTATAATGGATGACAACTTCACTACTATTGTCAAAGTGGCCAAATGGGGACGGGCTATATACATAAACATTCAAAAATTTGTGCAGTTTCAGTTAACAGTCAATGTTGTTGCTCTGATTACTAACTTTGTTTCTGCATGCATCACTGGAGCTGCTCCACTAACTGCTGTTCAATTGCTTTGGGTTAACTTGATTATGGACACTCTTGGTGCATTGGCACTGGCTACTGAACCTCCTAATGATGGACTTATGGAAAGACAACCAGTTGGAAGGAAAGCAAGTTTTATTACCAAACCAATGTGGAGGAATATCTTTGGTCAAAGTGTGTATCAACTAATTATCCTTGGAGTTCTAAATTTTGAGGGGAAGAGGCTACTTGGACTAAGTGGCTCAGATGCAACTGCAGTACTCAACACTTTGATATTCAACTCCTTTGTATTTTGCCAG 516 0.3934 MLTPNRCSILLYLLQVAKENADVIIMDDNFTTIVKVAKWGRAIYINIQKFVQFQLTVNVVALITNFVSACITGAAPLTAVQLLWVNLIMDTLGALALATEPPNDGLMERQPVGRKASFITKPMWRNIFGQSVYQLIILGVLNFEGKRLLGLSGSDATAVLNTLIFNSFVFCQ 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme35277g00001 172 Gene3D - 11 172 - -
Trme35277g00001 172 Pfam Cation transporting ATPase, C-terminus 75 172 IPR006068 -
Trme35277g00001 172 PANTHER CATION TRANSPORTING ATPASE 15 172 - -
Trme35277g00001 172 SUPERFAMILY Calcium ATPase, transmembrane domain M 40 172 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme35277g00001 Trme-Chr35277 8 615 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme35277g00001 15 172 Primary Pumps ATPases AT3G57330 83.544 3.68e-91 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme35277g00001 K01537 - gmx:100783489 283.878