Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme352641g00001 ATGAGTCGCGGTGGTGTTACCGGAACTAAGGGAAAGAAGAAGGGTGCAACCTTCACCATTGATTGTGCTAAACCAGTGGAAGACAAGATCATGGACATTGCTTCTCTTGAGAAGTTTCTTCAAGAG 126 0.4524 MSRGGVTGTKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQE 42
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme352641g00001 42 PANTHER 60S RIBOSOMAL PROTEIN L22 7 42 IPR002671 GO:0003735|GO:0005840|GO:0006412
Trme352641g00001 42 Pfam Ribosomal L22e protein family 14 42 IPR002671 GO:0003735|GO:0005840|GO:0006412
Trme352641g00001 42 Gene3D - 6 42 IPR038526 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme352641g00001 1 42 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 78.571 4.07e-19 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme352641g00001 K02891 - gmx:100499952 74.3294