Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme3523g00001 ATGCAGGAACTTGTTAATTTAGAGGCAATCGACCTAAGTGAGTGCAAAGAGTTGATCAACCTCCCTGATTTGTCTGGGGCATTAAAACTCAAACAGTTGCGCCTTTCCGGCTGTGAAAATTTATGTGAAGTTCAGGCTTCTGCTTTTTCTAAGGACACACTTGATACTTTGCTACTCGATAGGTGCACAAAATTGCAAAGTCTGATGGGTGAGAAGAATTTAACATCTCTAGCAAACTTCAGTGTCAAAGGCTGCTCAAGTCTGAAGGAACTTTCGCTGTCCTCGAATTCAATAATAAGGTTGGATTTAAGCAATACAGGAATCAAAATATTGCACCCTTCAATCGGTGTCATGAACAAACTTAGTTGTGTAGTAAACAAATCAAAATTAGAAGCCCTTTTTGATGGTCTGAAATTATTGAGATTACTACACTTGAAAGACTGTTGTAACTTGTTTGAACTCCCTGCAAACATTAGTTCCTTATCATCATTGTATGAATTAAGACTAGATGGAAGCAGTGTAGAGGAGTTGCCTGCTAGCATCAAGTACCTCTCAGTACTAGAAATTCAGTCTTTAAACAATTGCAGTAAGCTTCGTCGTCTGCCAGAACTTCCTTCAAGCATCAAAGAGTTTCAGGCCAACAATTGCACTTCGTTAATGACAATATCCACTTTGAAGACCTTTTCAACAAACATGGTTGGAACTAAAAAATACATTTCGTTTCAGAATAGCATTACGGTGGAATTAGATGGACCCTCCCATGACCGTATTACGGAAGATACCATATTAACAATGAAAAGTGCTGCTTTTCACAATGTATTAGTGAGAAAGTACAGATTCCAAACCCACAGCTACAGTTATAACAACAGTTATAACAGCGCCCAGGAAATTCAATTTGAGTCAAGATCACTTGAAGGCTATGATGAGAGAGAAGGCATTGACATTGAATCGTTTGAAATAGTTGATGACACGGAAGGCACTGACATTCTTCATGAGAGTTCTACAAAGTCTGGAGACAAAACTGAAACTTCTTCCCAAAAACAAGAACAATTAAAGAAGGATGAGGATTCTACTGCAGGAGGTTCTGATGTAGAATCGTGTTTCAATAAAACAATTAAG 1119 0.3816 MQELVNLEAIDLSECKELINLPDLSGALKLKQLRLSGCENLCEVQASAFSKDTLDTLLLDRCTKLQSLMGEKNLTSLANFSVKGCSSLKELSLSSNSIIRLDLSNTGIKILHPSIGVMNKLSCVVNKSKLEALFDGLKLLRLLHLKDCCNLFELPANISSLSSLYELRLDGSSVEELPASIKYLSVLEIQSLNNCSKLRRLPELPSSIKEFQANNCTSLMTISTLKTFSTNMVGTKKYISFQNSITVELDGPSHDRITEDTILTMKSAAFHNVLVRKYRFQTHSYSYNNSYNSAQEIQFESRSLEGYDEREGIDIESFEIVDDTEGTDILHESSTKSGDKTETSSQKQEQLKKDEDSTAGGSDVESCFNKTIK 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme3523g00001 373 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 101 222 - -
Trme3523g00001 373 MobiDBLite consensus disorder prediction 322 373 - -
Trme3523g00001 373 Gene3D Ribonuclease Inhibitor 74 237 IPR032675 -
Trme3523g00001 373 Gene3D Ribonuclease Inhibitor 1 73 IPR032675 -
Trme3523g00001 373 MobiDBLite consensus disorder prediction 324 360 - -
Trme3523g00001 373 SUPERFAMILY L domain-like 4 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme3523g00001 Trme-Chr3523 113 2230 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme3523g00001 6 222 WRKY Transcription Factor Family AT5G45050 28.458 1.94e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme3523g00001 - - psat:127076353 418.313