Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme351949g00001 ATGAATTACATCGCACTTCTCTCCGATTACAGCGATGCAATCGCCGATATAGTTTCCGATTGGCCACAATCACCGTTACCGGAATCTTACTACAAAAATCCATCTCACGACGAGAATAATCCACCGTCGGAGATAGCAAAACGGTTATCGTGGCTAATTCTTGTTGTTCTCTGTAAACTCGACGGAAAAGCTGAACTATACAAAGACGTTGCACTTTCGTATCTTTTTCTTGCGAATAACATGCAATACGTCGTCGTAAAAGT 263 0.4183 MNYIALLSDYSDAIADIVSDWPQSPLPESYYKNPSHDENNPPSEIAKRLSWLILVVLCKLDGKAELYKDVALSYLFLANNMQYVVVKV 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme351949g00001 88 SUPERFAMILY Cullin repeat-like 1 88 IPR016159 -
Trme351949g00001 88 Gene3D Exocyst complex component Exo70 1 88 - -
Trme351949g00001 88 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 88 IPR004140 GO:0000145|GO:0006887
Trme351949g00001 88 Pfam Exo70 exocyst complex subunit 1 88 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme351949g00001 Trme-Chr351949 1 263 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme351949g00001 1 88 EXO70 exocyst subunit family AT5G59730 57.895 6.01e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme351949g00001 K07195 - gmx:100801773 142.51