Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme35167g00001 ATGGACTTTTTCTCTGAATATGGCGATGCCAACCGGTACAAAATTCAAGAAGTCATTGGGAAAGGAAGTTACGGCGTTGTCTGTTCTGCCATTGACACTCATACCGGTGATAAAGTGGCCATTAAGAAAATTCACGACATCTTTGAGCATATATCTGATGCTGCAC 166 0.4217 MDFFSEYGDANRYKIQEVIGKGSYGVVCSAIDTHTGDKVAIKKIHDIFEHISDAA 55
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme35167g00001 55 ProSitePatterns Protein kinases ATP-binding region signature. 19 43 IPR017441 GO:0005524
Trme35167g00001 55 SUPERFAMILY Protein kinase-like (PK-like) 9 48 IPR011009 -
Trme35167g00001 55 Gene3D Phosphorylase Kinase; domain 1 3 55 - -
Trme35167g00001 55 ProSiteProfiles Protein kinase domain profile. 13 55 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme35167g00001 Trme-Chr35167 8 173 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme35167g00001 1 55 MAP Kinase Gene Family AT2G42880 89.091 3.81e-31 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme35167g00001 - - gmx:100815293 115.931