Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme35142g00001 ATGAGAGGAACAATAGGCTATCTTGCTCCGGAGTGGATTTCCGGGGTGGCTATTACAGCCAAAGCCGATGTTTACAGCTACGGAAAGATGCTTTTCGAGGTTGTATCAGGTAGAAGGAACTNTGATCCATCAGGAGATGATCAAGTTAGTTTCTTTCCTACCTTAGCAGCAAAAGTAGTTATTGAAGGTGGTAGTGTCATCACACTTTTGGACCCTAGATTGGAGGGAAATGCTGACATTGAGGAGGTTGCGCGAATAATAAAAGTTGCGTCGTGGTGTGTGCAACGCAATGAAACTCAAAGGCCTACAATGGGTCAG 318 0.4497 MRGTIGYLAPEWISGVAITAKADVYSYGKMLFEVVSGRRNXDPSGDDQVSFFPTLAAKVVIEGGSVITLLDPRLEGNADIEEVARIIKVASWCVQRNETQRPTMGQ 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme35142g00001 106 SUPERFAMILY Protein kinase-like (PK-like) 2 106 IPR011009 -
Trme35142g00001 106 Gene3D Transferase(Phosphotransferase) domain 1 1 106 - -
Trme35142g00001 106 ProSiteProfiles Protein kinase domain profile. 1 106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme35142g00001 106 Pfam Protein kinase domain 2 105 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme35142g00001 106 PANTHER OS07G0415500 PROTEIN 1 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme35142g00001 Trme-Chr35142 724 1041 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme35142g00001 3 106 Receptor kinase-like Gene Family AT1G29740 41.346 8.88e-21 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Trme35142g00001 Pkinase 1.1e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme35142g00001 - - gmx:100810583 169.088