Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme35139g00001 AACTATGCATCGATGGAGAAGAAAACTAAGGAATATGTTTTCATATATATTGGTGCCGGTATTTATGCGGTTGGTGCTTACTTGATTCAACATTACTTTTTTAGTATCATGGGAGAAAATCTCACCACAAGAGTTAGAAGAATGATGCTTGCAGCTATTTTGAGGAATGAAGTTGGATGGTTCGATGAGGAGGAGCACAACTCAAGTCTTGTTGCAGCTCGCCTCGCCACTGATGCAGCTGATGTGAAGTCGGCCATTGCTGAGAGGATATCAGTAATTTTGCAGAACATGACATCTCTTCTCACTTCTTTCATTGTTGCTTTCATTGTTGAATGGAGGGTTTCTTTACTCATCCTTGGAACTTTCCCTCTTCTTGTTCTAGCAAATTTTGCTCAG 396 0.404 NYASMEKKTKEYVFIYIGAGIYAVGAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIAERISVILQNMTSLLTSFIVAFIVEWRVSLLILGTFPLLVLANFAQ 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme35139g00001 132 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 14 130 IPR039421 -
Trme35139g00001 132 Pfam ABC transporter transmembrane region 7 130 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Trme35139g00001 132 SUPERFAMILY ABC transporter transmembrane region 12 129 IPR036640 GO:0005524|GO:0016020
Trme35139g00001 132 Gene3D ABC transporter type 1, transmembrane domain 1 132 IPR036640 GO:0005524|GO:0016020
Trme35139g00001 132 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 132 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme35139g00001 Trme-Chr35139 53 540 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme35139g00001 1 127 Calmodulin-binding Proteins AT2G36910 31.818 1.36e-12 61.6