Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme351321g00001 ATGCTTTATGGAAAATCAGAGAAAGTATGGGAAAGTGAGCTGCAAAAGCTTAAAAAGCTTCCAGATCTTAATATTTTCAGATTGTTGAAGTTGAGTTATGATGGACTTGACGACGAACAAAAGAATATCTTTCTTGATATAGCTTGCTTCTATAGAGGAGAACCGGAGAAAGCTGTAGCACTCACATTGGATTCTTCTGGTTTCTCTGCTTCTAAAGGAATAGATGATCTCAATGATAGAAGCCTTATATCTATTTCAAACG 262 0.3588 MLYGKSEKVWESELQKLKKLPDLNIFRLLKLSYDGLDDEQKNIFLDIACFYRGEPEKAVALTLDSSGFSASKGIDDLNDRSLISISN 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme351321g00001 87 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 85 IPR044974 GO:0006952
Trme351321g00001 87 SUPERFAMILY "Winged helix" DNA-binding domain 25 87 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme351321g00001 Trme-Chr351321 10 271 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme351321g00001 16 86 WRKY Transcription Factor Family AT5G45050 47.887 1.92e-14 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme351321g00001 - - tpra:123916959 135.961