Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme35104g00001 ATGACTAAAAATTTTACGGTAAAATTGGGTGAAGGAGGTTATGGAGATGTGTATAGAGGAAATCTAATAAGTGGACCATTTGTAGCCATAAAGATGTTGAAGATAAAATCAAATGCTANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNAGAATATACCATTCAAATGTGGTAAGACTTGTCGGGTTTTGTGTCGAAGGATCAAAACGTGCTCTTGTTTATGAATACATGCCTAATGGCTCTCTTGATAAATATATTTTCAACAAAGAGGGTGTTGTATCTTTAACTTACAACCAAATATATGAGATATCTCTGGGAGTAGCTCGTGGAATTTCTTATCTTCATGAGGGCTGTAATATGCAAATTTTACATTTTGATATTAAGCCTCATAATATCCTTCTTGATGAAAATTTCATACCTAAAGTTTCAGACTTTGGTCTTGCAAAGCTTTATCCTATTGACAATAGCATTGTCACTTTGACAGCAGCCAGGGGAACAATAGGGTACATGGCTCCCGAATTGTTCTACTATAATATCGGAGGGATATCATATAAGGCTGATGTGTATAGCTTTGGAATGCTTTTGATTGAAATGGCAAGTAGGAGAAGAAATTTGAATCCACAAGCTGAACATTCAAGTGAACTTTACTTTCCCTTTTGGATTTATGATCAATTGTATAAAAATAGAGAGAGGGAAATGGAAGATGTTATCATGGAAGAAATTAATGATGTTTTGAAGAAAATGTTCCTAGTTGCACTTTGGTGTATACAGTTGAAACCCRTTGATCGTCCTTCAATGAACAAAGTAGTGGAGATGCTTGAAGGAGATATTGAAAATATTGAAATGCCTCCAAAGCCTTTACTATATCCACATGAAACAATTCAAGAGAATCTTGATATCAACTCAAAGGAAACTGTATCAGATGTTGGCTCTACCAGTTATGTGGAGGAAATTGCAACTAATCCTTTATTGAAGTATTCAGCTTGA 993 0.3333 MTKNFTVKLGEGGYGDVYRGNLISGPFVAIKMLKIKSNAXXXXXXXXXXXXXRIYHSNVVRLVGFCVEGSKRALVYEYMPNGSLDKYIFNKEGVVSLTYNQIYEISLGVARGISYLHEGCNMQILHFDIKPHNILLDENFIPKVSDFGLAKLYPIDNSIVTLTAARGTIGYMAPELFYYNIGGISYKADVYSFGMLLIEMASRRRNLNPQAEHSSELYFPFWIYDQLYKNREREMEDVIMEEINDVLKKMFLVALWCIQLKPXDRPSMNKVVEMLEGDIENIEMPPKPLLYPHETIQENLDINSKETVSDVGSTSYVEEIATNPLLKYSA 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme35104g00001 330 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 297 IPR045874 GO:0004672
Trme35104g00001 330 ProSiteProfiles Protein kinase domain profile. 3 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme35104g00001 330 SUPERFAMILY Protein kinase-like (PK-like) 7 276 IPR011009 -
Trme35104g00001 330 Pfam Protein kinase domain 7 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme35104g00001 330 Gene3D Phosphorylase Kinase; domain 1 9 79 - -
Trme35104g00001 330 FunFam PR5-like receptor kinase 79 287 - -
Trme35104g00001 330 SMART serkin_6 3 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme35104g00001 330 Gene3D Transferase(Phosphotransferase) domain 1 80 284 - -
Trme35104g00001 330 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme35104g00001 Trme-Chr35104 96 1088 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme35104g00001 1 299 Receptor kinase-like Gene Family AT1G66910 47.697 2.34e-92 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Trme35104g00001 Pkinase 3.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme35104g00001 - - tpra:123912890 600.897