Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme35072g00001 TCAGAAATCAACTTTTTAGGAAGAATTTCTCACCCCAATTTGGTCAAGCTATTGGGTTATTGTACGGACGGTGATGAATTTCTCCTCGTGTACGAGTTCATGCCAAGGGGAAGCTTAGAGAGCCATCTCTTTAAAAGAAATCCTAACATAGAATCACTTTCATGGAACACAAGACTCAAAATCGCTATAGATGCAGCTCGAGGCTTGGCATTCTTGCACTCATCAGAAAAGCAAATCATATATAGAGATTTCAAAGCTTCCAATATACTTCTTGATGGGAATTACAATGCAAAGATTTCGGATTTTGGGTTGGCGAAATTTGGGCCATCTGGAGAAGATTCGCACGTGACTACTCGGATCATGGGCACGTATGGTTATGCTGCTCCAGAATACATTGCAACAGGTCATTTGTATGTGAAGAGTGATGTTTATGGATTTGGTGTGGTGCTGCTTGAAATGTTGACAGGGTTGCAAGCACTTGATATAAAAAGGTTAGAGGGCCAATATTCACCAAAAGCAGCATTTGAAACAGCTCAGCTTATTCTTAAATGCCTTGAATCTGACCCTAAAAAACGTCCTACTATGGAAGATGTTTTGGAGACATTAGAAGGCATAAA 617 0.4019 SEINFLGRISHPNLVKLLGYCTDGDEFLLVYEFMPRGSLESHLFKRNPNIESLSWNTRLKIAIDAARGLAFLHSSEKQIIYRDFKASNILLDGNYNAKISDFGLAKFGPSGEDSHVTTRIMGTYGYAAPEYIATGHLYVKSDVYGFGVVLLEMLTGLQALDIKRLEGQYSPKAAFETAQLILKCLESDPKKRPTMEDVLETLEGI 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme35072g00001 205 SUPERFAMILY Protein kinase-like (PK-like) 2 202 IPR011009 -
Trme35072g00001 205 Gene3D Phosphorylase Kinase; domain 1 1 34 - -
Trme35072g00001 205 Pfam Protein tyrosine and serine/threonine kinase 1 202 IPR001245 GO:0004672|GO:0006468
Trme35072g00001 205 FunFam Os07g0541700 protein 34 123 - -
Trme35072g00001 205 ProSitePatterns Serine/Threonine protein kinases active-site signature. 79 91 IPR008271 GO:0004672|GO:0006468
Trme35072g00001 205 PANTHER OS01G0588500 PROTEIN-RELATED 1 203 - -
Trme35072g00001 205 Gene3D Transferase(Phosphotransferase) domain 1 35 205 - -
Trme35072g00001 205 ProSiteProfiles Protein kinase domain profile. 1 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme35072g00001 Trme-Chr35072 78 1105 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme35072g00001 2 202 Glycoside Hydrolase AT3G07070 46.957 2.22e-67 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Trme35072g00001 PK_Tyr_Ser-Thr 1.5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme35072g00001 - - gmx:100794193 336.265