Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme35057g00001 GGCACTCCCCTCGCTAATTTTGATCCAACAACTCCTGATAAATTTGACAAAAACTATTACTCCAATCTTCAACTTAAAAAGGGATTGCTTCAAAGTGATCAAGAGTTGTTCTCAACATCGGGTGCCGATACCATTAGCATTGTCAACAAATTCAGTGCTGACCAAAAAGCTTTCTATGATAACTTTGCGGCTGCAATGATTAAAATGRGYAATATTGGTGTGTTAACTGGGAAACAAGGAGAGATTAGAAAACAATGCAATTTTATTAACTCAAAATCTGTTGAATTAGGTCTAGCTAATGTGGCAGAAACAGATTCATCAGAAGAGGGTATGGTTAGCTCAATATAA 348 0.3621 GTPLANFDPTTPDKFDKNYYSNLQLKKGLLQSDQELFSTSGADTISIVNKFSADQKAFYDNFAAAMIKMXNIGVLTGKQGEIRKQCNFINSKSVELGLANVAETDSSEEGMVSSI 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme35057g00001 115 PRINTS Plant peroxidase signature 64 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme35057g00001 115 PRINTS Plant peroxidase signature 6 21 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme35057g00001 115 PRINTS Plant peroxidase signature 22 39 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme35057g00001 115 Pfam Peroxidase 4 53 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme35057g00001 115 Gene3D Peroxidase, domain 2 1 69 - -
Trme35057g00001 115 ProSiteProfiles Plant heme peroxidase family profile. 1 90 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme35057g00001 115 SUPERFAMILY Heme-dependent peroxidases 2 90 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trme35057g00001 115 PANTHER PEROXIDASE 72-RELATED 4 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme35057g00001 Trme-Chr35057 2 349 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme35057g00001 1 115 Peroxidase AT2G38380 53.043 2.72e-33 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme35057g00001 K00430 - gmx:100804765 171.4