Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme35054g00001 GTTATCAGTGGGACAATCAATGAGAATGGTTGCTTACTGGTCAAGGCAACTCATGTTGGATCTGAGACTGCACTTTCTCAAATTGTTCAACTTGTAGAAGCTGCTCAACTTGCAAGAGTGCCAGTTCAGAAGCTTGTAGATGATATTTAA 150 0.4067 VISGTINENGCLLVKATHVGSETALSQIVQLVEAAQLARVPVQKLVDDI 49
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme35054g00001 49 Gene3D - 1 36 - -
Trme35054g00001 49 Pfam E1-E2 ATPase 1 48 - -
Trme35054g00001 49 SUPERFAMILY Calcium ATPase, transduction domain A 1 32 IPR008250 -
Trme35054g00001 49 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 1 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme35054g00001 Trme-Chr35054 316 465 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme35054g00001 1 49 Primary Pumps ATPases AT1G63440 71.429 3.45e-17 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme35054g00001 K17686 - egr:104421533 87.0409