Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme35022g00001 ATGTCAGTAATTCATCTCTCGCCATTCTCACCACCAAGAAAGAAACTCCGTTTTCCACAACATCCTGATTTCCCTCTCGATGTTGTCCAGTTTCCAATACCGACATTTTCGGGCAACCCTCTTAACCCTTTGTGTTGTGTATCATCTTCGGATCATTATAACGCTCCTGCCGCAGGCATACAGGGAGCCAGGCATGCTCAAATTGGAATATCTTTATCAGATCTTCACCTTAACAACAATAATAATAAACTTCAGTTAGGTGTGTTTCCAAAGAATCCTGAGACGACGATTTCTAATGATAAGAGCAAAGAAAGTTTATCATGTTTGTTGACTATAGGAAATTCTCATAAGAGAAGTTTGGAGATAAAATCTGATAATAATGTTAAGAGACACCAATTTTTGCTWTTTGGTCAACCAATTCTCACTGAACAACAAATCTCTCGAAAAGTTTCTAGCGATGATGTTTTGTTGTCTCAGAATAAGGACAAAGAGAAATGGTTTTTCAATGATACTAGTGCTAGTGCTGAGTTTTGTTGGCAGCTTGGATTAGATACCGGTCATTGCAAGGTTTTCTTGGAGTCGGAAGATGTTGGAAGAACCCTAGACTTGTCATGTGTTGGTTCTTATGAAGAACTATATCGAAAACTGGCTAAGATGTTTGGAATTGAAAGATCTGAGATGTTGAGTCGTGTACTCTACCGTGACGCAACTGGTGCTGTTAAACAAACCGGCGAAGAACCCTTCAGGTATTAA 753 0.3918 MSVIHLSPFSPPRKKLRFPQHPDFPLDVVQFPIPTFSGNPLNPLCCVSSSDHYNAPAAGIQGARHAQIGISLSDLHLNNNNNKLQLGVFPKNPETTISNDKSKESLSCLLTIGNSHKRSLEIKSDNNVKRHQFLLFGQPILTEQQISRKVSSDDVLLSQNKDKEKWFFNDTSASAEFCWQLGLDTGHCKVFLESEDVGRTLDLSCVGSYEELYRKLAKMFGIERSEMLSRVLYRDATGAVKQTGEEPFRY 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme35022g00001 250 Gene3D - 184 250 - -
Trme35022g00001 250 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 15 248 IPR044835 GO:0003677|GO:0006355|GO:0009725
Trme35022g00001 250 ProSiteProfiles PB1 domain profile. 185 250 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme35022g00001 Trme-Chr35022 52 804 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme35022g00001 1 248 B3 DNA Binding Superfamily AT2G28350 46.415 4.59e-56 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme35022g00001 - - gmx:100778135 300.441