Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme350203g00001 ATGACCAAGGACAATAACTTGTTGGGTACATTCAAGCTTTCTGGCATTCCTGCTGCTCCAAGGGGTGTTCCCCAGATCAATGTTCGTTTTGAAATTGATGCTAATGGTATCTTAGATGTCTCTGCTGAGGACATGTCTACTGGGCAAAAGAACAAGATCACTATCACTAATGACAAAGGCAGGCTTTCAAAGGAGGAGATTGAGAAGATGGTGCAGGAGGCAGCGAAGTACAAGGTTGAGGATGAGGAGCACAAAAAAAAGACCGTTGCTAAGAATTCCATGGTGAAGATGGTGCAGGATGAGGAAAA 308 0.4416 MTKDNNLLGTFKLSGIPAAPRGVPQINVRFEIDANGILDVSAEDMSTGQKNKITITNDKGRLSKEEIEKMVQEAAKYKVEDEEHKKKTVAKNSMVKMVQDEE 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme350203g00001 102 Coils Coil 67 87 - -
Trme350203g00001 102 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 1 102 IPR029047 -
Trme350203g00001 102 Pfam Hsp70 protein 1 100 IPR013126 GO:0005524|GO:0140662
Trme350203g00001 102 PANTHER HEAT SHOCK PROTEIN 70KDA 1 96 IPR013126 GO:0005524|GO:0140662
Trme350203g00001 102 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 1 93 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme350203g00001 Trme-Chr350203 16 323 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme350203g00001 2 94 Calmodulin-binding Proteins AT3G12580 83.871 1.41e-47 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme350203g00001 K03283 - dct:110099937 159.073