Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme35016g00001 GATTTAAGTGGCAACAAGATCCATGATACAATTCCCTATCAGTTGCCACCAAATCTTACAAGCTTAAATCTTGCGGGAAATAACTTAACCGGAAATCTTCCGTATTCGATTGCTCTCATGGTTTCACTCAATTATCTGAATGTGAGCAATAATGCACTCTCTATGTCAATCGCTGACGTTTTTGCTAATCATTCCCGTCTTGATACACTGGATCTATCATTTAATAACTTTTCTGGGGATCTTCCACCTTCGTTTGGTTCGCTGTCAAGTCTCTCTTCTCTTTTCTTGCAGAAGAATCAGTTGACCGGTTCTCTTAGTGTTCTTGATGGTTTGCCGTTGGATAATTTAAATGTTGCAAACAATAATTTTAGTGGATGGATACCTCACGAGCTTAAATCTATCAATAATTTCAAGTAA 417 0.3765 DLSGNKIHDTIPYQLPPNLTSLNLAGNNLTGNLPYSIALMVSLNYLNVSNNALSMSIADVFANHSRLDTLDLSFNNFSGDLPPSFGSLSSLSSLFLQKNQLTGSLSVLDGLPLDNLNVANNNFSGWIPHELKSINNFK 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme35016g00001 138 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 135 - -
Trme35016g00001 138 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 1 138 - -
Trme35016g00001 138 Gene3D Ribonuclease Inhibitor 1 138 IPR032675 -
Trme35016g00001 138 Pfam Leucine Rich Repeat 18 36 IPR001611 GO:0005515
Trme35016g00001 138 Pfam Leucine Rich Repeat 67 88 IPR001611 GO:0005515
Trme35016g00001 138 SUPERFAMILY L domain-like 1 135 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme35016g00001 1 138 Strubbelig Receptor Gene Family AT1G53730 50.725 2.51e-38 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme35016g00001 - - gmx:100803711 191.815