Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme349885g00001 ATGCCGGAATATTATAGTTTTTTTTCTGGAACTTACTTTGCCTTGTCCAACATAGGTGGTTTGATCCACCCTAATGCTTCCAAAAAAGTCTTGGATGAACTTTCTGCAGCTCTTGAAGTTCCTTTGGAATCTGGGACTGTCAATCGGGGCAGCGTTGCTCTAGCTCCT 168 0.4345 MPEYYSFFSGTYFALSNIGGLIHPNASKKVLDELSAALEVPLESGTVNRGSVALAP 56
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme349885g00001 56 SUPERFAMILY Pentein 10 54 - -
Trme349885g00001 56 Gene3D - 6 56 - -
Trme349885g00001 56 Pfam eIF-6 family 10 52 IPR002769 GO:0042256|GO:0043022
Trme349885g00001 56 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 9 54 IPR002769 GO:0042256|GO:0043022
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme349885g00001 Trme-Chr349885 1 257 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme349885g00001 10 55 Eukaryotic Initiation Factors Gene Family AT3G55620 58.696 6.37e-13 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme349885g00001 K03264 - cne:CNJ00650 60.077