Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme34966g00001 ATGGGCAAGACCACCCTTGCTCAACTTGTGTACAATGACCACAGGATCAAGGAGAATTTTGAACACAGAGCTTGGGTCTATGTTTCAGAAACTTTTGATGTTATTGGGCTTACCAAAGCAATTCTGAGATCATTTCACTCTTCAGCAGATGGTGAAGTCTTGAATCTACTCCAAAATCAACTGCAGCAGGAGCTAATTGGCAAGAAATATTTGCTTGTTCTTGATGATGTCTGGAACCGGAGTGAGGAATGTTGGGAGCGCTTACTACTTCCCTTATACCATGGATCTATTGGAAGTAAAATTATTGTGACAACACGAGACAAGGAGGTAGCATCTGCCATGAAGTCCATTAAGGTACTTAATTTAAAGAAACTGAAGAAAAGTGAATGTTGGAGTATGTTTGTGAGACATGCTTTTCATGGCAGGAATGCAAGTGAATATCCAAATATTGAATCAATTGGAAAGAAAATAGTAAAAAAGTGTGGAGGGTTGCCTTTAGCTATAAAAATATTGGGGAATCTCTTGCGAAGAAAATTCTCTCCACGTGAATGGGCTAATATATTGGAGAAAGATGTGTGGCATTTATCAGAGGGTGACGGTAACATTAACTCAGTACTGAGATTGAGTTACCATCATCTCCCTTCCAATCTAAAGCGTTGTTTTGCTTATTGTTCCATATTACCCAAAGGTAGACGATTTGACAAAGATGAAACAATCAAGATTTGGATGGCAGATGGTTTACTGAAGTGCTGCAGAACAAACAAAAGTGAAGAAGAGTTGGGGGAATTTTACTTGCGATTAGAGGGTGATATGCTGCAAGATGTCTCAGAAAGGACACGTCACATTTGGTGTTCTCTTGATTCAAAAGATG 871 0.3915 MGKTTLAQLVYNDHRIKENFEHRAWVYVSETFDVIGLTKAILRSFHSSADGEVLNLLQNQLQQELIGKKYLLVLDDVWNRSEECWERLLLPLYHGSIGSKIIVTTRDKEVASAMKSIKVLNLKKLKKSECWSMFVRHAFHGRNASEYPNIESIGKKIVKKCGGLPLAIKILGNLLRRKFSPREWANILEKDVWHLSEGDGNINSVLRLSYHHLPSNLKRCFAYCSILPKGRRFDKDETIKIWMADGLLKCCRTNKSEEELGEFYLRLEGDMLQDVSERTRHIWCSLDSKD 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme34966g00001 290 Pfam NB-ARC domain 1 190 IPR002182 GO:0043531
Trme34966g00001 290 Gene3D - 1 121 IPR027417 -
Trme34966g00001 290 Gene3D - 210 288 IPR036388 -
Trme34966g00001 290 PRINTS Disease resistance protein signature 161 175 - -
Trme34966g00001 290 PRINTS Disease resistance protein signature 64 78 - -
Trme34966g00001 290 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 224 IPR027417 -
Trme34966g00001 290 Gene3D - 124 209 IPR042197 -
Trme34966g00001 290 PANTHER DISEASE RESISTANCE PROTEIN RP 1 265 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme34966g00001 Trme-Chr34966 16 1000 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme34966g00001 1 183 WRKY Transcription Factor Family AT5G45050 28.042 1.22e-06 48.1