Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme3495g00001 ATGATTGAATTGATTTACAAAGTGGAATGGACTAGGCCGTTAATTAAGATCAGATTGATCGTTTATGAAAGGCTGCTTAGGACACAAGATGACTTTGTCTGGCCTGTTGACACTGCTTTCATGGGCCGCTTCATCATTGATGTTGAGTTTCTTGACCTGAAGATATGCCATATGAATGATGGAGAACCTAGTTCTGTATGGTCATATGATGGAAATTCACAATGTGTTGAAGCTCAAAGAAGTACTCTCCATTGCCTCTCTCGCATGTTTGATGAGGCTATACATGCTGACCTAACCATTATCACGGCCGATGGTACATTGAGAGCTCACAAGGCAATTTTGTCGGCGAGTTCCCCCGTGTTTCAAAGCATGTTTCATCACAACCTGAAGGAAAAAGAGTCTTCAACAATCCATATCGAAGACATGTCACTTGAATCATGTACTGCTCTTCTAAGTTACTTGTACGGAGCAATTAAACAAGAAGATTTCCGGAAACACTGTCTTCCATTGCTCGGAGCCGCGAATAAGTATGATATAGGTAGTCTTAAAGATTTATGTGAGGAAAACCTTCTTGAAGATATTAACTCAGACAATGTTCTTGAGATGCTAAATGAGGCTTGGCTTTATCAATTACACAAGTTAAAGAAAGGATGTTTAACATTCTTATTTGAATTTGGTAAAATATATGATGTTAAAGATGATGAAATAAATAACCTTTTCCAGCATGCAGATAGGGAGCTAGTGATGGAGATGTTTCAGGTGATGCTTACAATTTCCAACCCAGAATAG 789 0.3866 MIELIYKVEWTRPLIKIRLIVYERLLRTQDDFVWPVDTAFMGRFIIDVEFLDLKICHMNDGEPSSVWSYDGNSQCVEAQRSTLHCLSRMFDEAIHADLTIITADGTLRAHKAILSASSPVFQSMFHHNLKEKESSTIHIEDMSLESCTALLSYLYGAIKQEDFRKHCLPLLGAANKYDIGSLKDLCEENLLEDINSDNVLEMLNEAWLYQLHKLKKGCLTFLFEFGKIYDVKDDEINNLFQHADRELVMEMFQVMLTISNPE 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme3495g00001 262 CDD BTB_POZ_ZBTB_KLHL-like 95 177 - -
Trme3495g00001 262 SMART BTB_4 96 194 IPR000210 GO:0005515
Trme3495g00001 262 PANTHER OS08G0495500 PROTEIN-RELATED 17 261 IPR044714 -
Trme3495g00001 262 Gene3D Potassium Channel Kv1.1; Chain A 68 223 IPR011333 -
Trme3495g00001 262 SUPERFAMILY POZ domain 80 192 IPR011333 -
Trme3495g00001 262 Pfam BTB/POZ domain 88 192 IPR000210 GO:0005515
Trme3495g00001 262 ProSiteProfiles BTB domain profile. 96 155 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme3495g00001 Trme-Chr3495 424 2024 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Trme3495g00001 BTB 7.5e-23 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme3495g00001 K10523 - gmx:100787262 397.897