Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme34914g00001 TTGCAAGCACAAAGTGCACTTGCTGGCACCGGAACTGCAGCTGTGGCTGTTAAATATGGAGGACCGATGGATGTGGCCAGGCAAGTTCTCCGGTCAGAGGGGGGTATGAGAGGTCTTTTCAAAGGCTTGGTTCCCACGATGGGACGTGAGATACCTGGAAATGCAATAATGTTTGGCGTATATGAAGCATTAAAGCAACGGTTTGCAGGTGGCACCGATACCTCTGGTCTAAGTAGAGGTTATCTGATTGTTGCCGGAGGCTTGGCTGGAGCATCTTTCTGGTTCATTGTTTACCCAACAGATGTTATTAAAAGTGTGCTTCAAGTAGATGATTATAAGAACCCTAAGTTTTCGGGTTCATTTGATGCTTTCAGAAAGATTATGGCTTCTGAGGGATTCAAAGGCCTATATAAAGGTTTTGGTCCTGCAATGGGCAGAAGTGTTCCTGCAAATGCAGCATGCTTCTTAGCATATGAGATGACAAGATCAGCTTTAGGATGA 501 0.4531 MQAQSALAGTGTAAVAVKYGGPMDVARQVLRSEGGMRGLFKGLVPTMGREIPGNAIMFGVYEALKQRFAGGTDTSGLSRGYLIVAGGLAGASFWFIVYPTDVIKSVLQVDDYKNPKFSGSFDAFRKIMASEGFKGLYKGFGPAMGRSVPANAACFLAYEMTRSALG 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme34914g00001 166 Gene3D Mitochondrial carrier domain 1 166 IPR023395 -
Trme34914g00001 166 Pfam Mitochondrial carrier protein 83 165 IPR018108 -
Trme34914g00001 166 Pfam Mitochondrial carrier protein 15 69 IPR018108 -
Trme34914g00001 166 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 165 - -
Trme34914g00001 166 ProSiteProfiles Solute carrier (Solcar) repeat profile. 77 164 IPR018108 -
Trme34914g00001 166 SUPERFAMILY Mitochondrial carrier 4 159 IPR023395 -
Trme34914g00001 166 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 67 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme34914g00001 Trme-Chr34914 360 860 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme34914g00001 21 165 Antiporters AT1G79900 36.301 1.76e-25 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme34914g00001 K15109 - gmx:100791908 301.982