Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme348835g00001 ATGAGCGTTGTACGAAAAGTTGTTTTCACTATTGATGAGAAAGAACGTGAGAAGAGTATTGAGGAAATGGAAGTGGTTTTTCAATTTCTTGAAAATGAACTCAAGGACAAATTCTTTGGTGGAGAAGAGATTGGCATTGTTGACATTACTGCAGCCTTCATAGCTTTACATGAA 174 0.3621 MSVVRKVVFTIDEKEREKSIEEMEVVFQFLENELKDKFFGGEEIGIVDITAAFIALHE 58
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme348835g00001 58 Gene3D - 1 57 - -
Trme348835g00001 58 Pfam Glutathione S-transferase, C-terminal domain 11 56 IPR004046 -
Trme348835g00001 58 SUPERFAMILY GST C-terminal domain-like 5 52 IPR036282 -
Trme348835g00001 58 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 1 58 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme348835g00001 Trme-Chr348835 19 192 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme348835g00001 1 55 Glutathione S-transferase Gene Family AT3G09270 50.000 7.03e-08 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme348835g00001 K00799 - gmx:100527851 68.1662