Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme34880g00001 GACATTAAACCGGAGAATCTTCTTGTTGGTGCACAGGGTGAGCTGAAGATAGCAGATTTTGGGTGGTCAGTGCACACATTCAATCGCAGGCGGACCATGTGCGGCACACTGGATTACCTTCCACCTGAGATGGTGGAGAGTGTGGAGCATGATGCGAGTGTGGATATATGGAGCCTTGGTGTCCTTTGCTATGAGTTTCTTTATGGAGTCCCCCCTTTTGAGGCTAAAGAACATTCTGATACTTATAGGAGGATAATTCAAGTGGATCTCAAGTTCCCTCCTAAACCAATTGTTTCTTCTGCTGCGAAAGACCTCATCAGCCAGATGCTGGTCAAGGATTCCTCTCAAAGACTTCCATTGCACAAACTCCTTGAACACCCTTGGATTGTTCAGAATGCGGAGCCCTCCGGTATATACAGAAGCTAG 426 0.4718 DIKPENLLVGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDASVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIIQVDLKFPPKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIVQNAEPSGIYRS 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme34880g00001 141 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 1 137 IPR030616 GO:0004672
Trme34880g00001 141 Pfam Protein kinase domain 1 129 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme34880g00001 141 SMART serkin_6 1 129 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme34880g00001 141 ProSiteProfiles Protein kinase domain profile. 1 129 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme34880g00001 141 SUPERFAMILY Protein kinase-like (PK-like) 1 132 IPR011009 -
Trme34880g00001 141 Gene3D Transferase(Phosphotransferase) domain 1 1 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme34880g00001 Trme-Chr34880 104 1036 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme34880g00001 1 135 CBL-interacting serine-threonine protein kinases AT5G10930 39.007 5.55e-26 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Trme34880g00001 Pkinase 3.6e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme34880g00001 K08850 - gmx:100775451 290.812